PROTEIN: HRGMv2_0175_1_574
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Protein File & Metadata
Source:
HRGMv2_0175_1_574.pdb
Genome ID:
Protein ID:
HRGMv2_0175_1_574
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Protein Sequence
MSIIIKEVKE DDKALKKAFI KFPTDVLYKN SPYYVPSLVL DELGTLNEKE NPAFDFCEKQ 60 LFLAYRDGEI VGRIAGIINH TANEIWNQKN ARFGFVDFID DNEVVDALFD AAGKWAKAKG 120 MNVIVGPMGF TDLDHEGLLI EGYDRESTMS TTYSYPYYRD QIERLGFEKD ADWNEYRIPV 180 PDSVPERHQR IANMVMQRYG LKVLKFKSLK QITPYVSKIF ELLNVAYKPL YGFAPLTQRQ 240 IDYYVKMYVP LLRWDLVSII IKEDTDEVVG FGIAMPSLSR GLIKSRGRFL PFGWINLLRD 300 LKSKKNPVVD LLLIGISPEY QGKGVNAIIF NDFIPSAHKC GFKFAESNPE LEMNNKVASL 360 WDGFNAENHK KRRAYKKNI 379
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 379 | 16 | 390 | 0.8966 |
0.9314 |
| AF-X8EWX4-F1-model_v4 | 1 | 379 | 19 | 393 | 0.8936 |
0.9318 |
| AF-P9WJM7-F1-model_v4 | 2 | 379 | 1 | 313 | 0.7288 |
0.818 |
| AF-K0EMI4-F1-model_v4 | 1 | 379 | 11 | 314 | 0.706 |
0.8184 |
| AF-Q54DW0-F1-model_v4 | 2 | 379 | 1 | 321 | 0.6557 |
0.7332 |
| AF-K0EYT8-F1-model_v4 | 1 | 378 | 11 | 259 | 0.6313 |
0.7936 |
| AF-A0A077ZCP6-F1-model_v4 | 32 | 379 | 1 | 249 | 0.6063 |
0.7512 |
| AF-Q9NAR1-F1-model_v4 | 1 | 378 | 36 | 332 | 0.6043 |
0.7533 |
| AF-O02226-F1-model_v4 | 1 | 378 | 36 | 332 | 0.6039 |
0.7518 |
| AF-Q8CZ30-F1-model_v4 | 4 | 379 | 1 | 289 | 0.6036 |
0.7139 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 379 | 15 | 339 | 0.7563 |
0.848 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 379 | 410 | 739 | 0.4938 |
0.7436 |
| A0A7C8H9M3 | GH3 | 1 | 377 | 550 | 877 | 0.4841 |
0.772 |
| AF-A0A146FCW8-F1-model_v4 | GH3 | 1 | 379 | 534 | 859 | 0.4794 |
0.7648 |
| AF-A0A1D9PUT2-F1-model_v4 | GH3 | 1 | 379 | 585 | 967 | 0.4792 |
0.6943 |
| AF-A2QDM1-F1-model_v4 | GH3 | 1 | 379 | 537 | 859 | 0.4788 |
0.7699 |
| AF-A0A384J7C8-F1-model_v4 | GH3 | 1 | 379 | 583 | 955 | 0.4787 |
0.7009 |
| UPL03096.1 | GH3 | 1 | 379 | 286 | 965 | 0.4783 |
0.6918 |
| AF-A0A7U2MF49-F1-model_v4 | GH3 | 1 | 379 | 504 | 833 | 0.4778 |
0.7458 |
| AF-G2XQQ8-F1-model_v4 | GH3 | 1 | 379 | 608 | 980 | 0.4759 |
0.7007 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 379 | 15 | 339 | 0.7563 |
0.848 |
| A0A7C8H9M3 | GH3 | 1 | 377 | 550 | 877 | 0.4841 |
0.772 |
| UPL03096.1 | GH3 | 1 | 379 | 286 | 965 | 0.4783 |
0.6918 |
| A0A7U2MF49 | GH3 | 1 | 379 | 504 | 833 | 0.4778 |
0.7458 |
| V9M3A9 | GH3 | 1 | 377 | 537 | 858 | 0.4672 |
0.7521 |
| A0A7H8QUW2 | GH3 | 1 | 379 | 209 | 946 | 0.464 |
0.6674 |
| A0A161HFD8 | GH3 | 1 | 379 | 572 | 967 | 0.4605 |
0.6663 |
| Q6MFP1 | GH3 | 1 | 379 | 599 | 1081 | 0.4604 |
0.6863 |
| E5A892 | GH3 | 1 | 379 | 541 | 883 | 0.4587 |
0.705 |
| A0A2V1AHZ9 | GH3 | 1 | 379 | 235 | 987 | 0.4587 |
0.6685 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7q3a-assembly1.cif.gz_A | 1 | 379 | 17 | 339 | 0.7332 |
0.8286 |
| 2c27-assembly1.cif.gz_A | 6 | 378 | 1 | 301 | 0.7303 |
0.8313 |
| 5kgh-assembly1.cif.gz_A | 3 | 379 | 1 | 315 | 0.7272 |
0.8143 |
| 7q3a-assembly2.cif.gz_B | 1 | 379 | 16 | 340 | 0.727 |
0.8186 |
| 5kga-assembly1.cif.gz_B | 3 | 379 | 1 | 315 | 0.7243 |
0.8114 |
| 5kf2-assembly1.cif.gz_A | 3 | 379 | 1 | 315 | 0.7241 |
0.8131 |
| 5kgh-assembly1.cif.gz_B | 3 | 379 | 1 | 312 | 0.7215 |
0.8113 |
| 5kf1-assembly1.cif.gz_B | 3 | 379 | 1 | 311 | 0.7196 |
0.8114 |
| 1p0h-assembly1.cif.gz_A | 4 | 377 | 1 | 290 | 0.716 |
0.8296 |
| 2wpw-assembly4.cif.gz_D | 2 | 379 | 1 | 321 | 0.6863 |
0.7689 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 379 | 16 | 390 | 0.8966 |
0.9314 |
| AF-D3Q4A8-F1-model_v4 | 2 | 379 | 1 | 306 | 0.7716 |
0.8704 |
| AF-Q5EDG0-F1-model_v4 | 2 | 377 | 1 | 301 | 0.7566 |
0.86 |
| AF-C6WPR7-F1-model_v4 | 2 | 377 | 1 | 297 | 0.7555 |
0.8643 |
| AF-C7QKH8-F1-model_v4 | 1 | 377 | 1 | 314 | 0.7514 |
0.84 |
| AF-B8HD44-F1-model_v4 | 1 | 379 | 4 | 321 | 0.7505 |
0.8388 |
| AF-C7MRC4-F1-model_v4 | 2 | 379 | 1 | 306 | 0.7501 |
0.8467 |
| AF-D2S4P5-F1-model_v4 | 1 | 379 | 1 | 308 | 0.7487 |
0.844 |
| AF-B0RAV5-F1-model_v4 | 1 | 378 | 11 | 304 | 0.7485 |
0.8726 |
| AF-A5CTZ8-F1-model_v4 | 1 | 378 | 13 | 306 | 0.7477 |
0.874 |