PROTEIN: HRGMv2_0156_1_4416
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Protein File & Metadata
Source:
HRGMv2_0156_1_4416.pdb
Genome ID:
Protein ID:
HRGMv2_0156_1_4416
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Protein Sequence
MSAPVLNGPF VLPMFRSFVP RKMQPWIYLF IAVIFQLSGG VYLGALNQMI GSMSLMREDI 60 LMCMYANLAG MAIYFPLLFR MKFRFTNKTL LTSAALGVLL CNLIAPHITF LPLLWLVCFI 120 EGMCKIQGTF ECMSNIQLWM TPKRDFTVFF PWLHIVILGS IQLSDLITTR LMYHYHWTYM 180 NLFVAGLMLI VLLIQFTCVK HFRFMRKFPL FGIDWLGGIL WAALLAEIAF LFNYGDWYDW 240 WNSPVIRQLT IVIFITLGIC IWRMMTVRHP FLEPKMWTYR HFLPLLGLVT LVEAFLATEH 300 VLEEVFYEEV MKYEELVSSQ LDWLAIVGIV CGCVFSYWWM HVKQYNYVRL VIVGFIGLIG 360 YLIGFYLTLS TDIHISQLYL LTVCRGFAYA VLSATFMVCL EEIMTFQHFF QGLSVFNMLH 420 MVVGGVVGAA VYAQGLAYYV PDNLARYGSA IDHVAFSSSP FNLGHYMEEF ISQMMEISIK 480 QIYGWVAYAC IFLFLLLLLY DFPARRSLKS IPSWKEVARE VKNTFWRTTH TPSEKEK 537
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GSP9-F1-model_v4 | 1 | 517 | 12 | 549 | 0.8224 |
0.8774 |
| AF-G3XD81-F1-model_v4 | 1 | 506 | 1 | 497 | 0.8204 |
0.8772 |
| AF-P0AEJ0-F1-model_v4 | 1 | 506 | 1 | 501 | 0.8053 |
0.8586 |
| AF-P52600-F1-model_v4 | 1 | 506 | 2 | 505 | 0.8027 |
0.8517 |
| AF-Q9I482-F1-model_v4 | 1 | 522 | 1 | 480 | 0.799 |
0.8589 |
| AF-A0A0H3GNL5-F1-model_v4 | 1 | 505 | 5 | 516 | 0.7967 |
0.8482 |
| AF-Q9I4A2-F1-model_v4 | 5 | 509 | 3 | 503 | 0.7945 |
0.839 |
| AF-A0A0H3GPJ5-F1-model_v4 | 1 | 508 | 1 | 469 | 0.791 |
0.8643 |
| AF-A0A0H3GU91-F1-model_v4 | 1 | 505 | 1 | 500 | 0.7898 |
0.8447 |
| AF-Q9HZ88-F1-model_v4 | 25 | 503 | 1 | 485 | 0.7894 |
0.8652 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 4 | 510 | 7 | 537 | 0.7243 |
0.7961 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 6 | 505 | 16 | 463 | 0.6426 |
0.7468 |
| ARF89445.1 | GT1 | 1 | 511 | 65 | 958 | 0.6423 |
0.8664 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 9 | 528 | 30 | 744 | 0.5941 |
0.7904 |
| A0A918L8E6 | GT2 | 10 | 537 | 1 | 547 | 0.5586 |
0.6428 |
| A0A3C1RID2 | GH17 | 6 | 537 | 6 | 646 | 0.5513 |
0.6673 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 4 | 535 | 2 | 660 | 0.5428 |
0.6557 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 507 | 299 | 751 | 0.5419 |
0.757 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 5 | 536 | 8 | 730 | 0.5405 |
0.6534 |
| AF-A0A8A3PDC7-F1-model_v4 | CE0 | 1 | 506 | 350 | 823 | 0.5402 |
0.7418 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 4 | 510 | 7 | 537 | 0.7243 |
0.7961 |
| ARF89445.1 | GT1 | 1 | 511 | 65 | 958 | 0.6423 |
0.8664 |
| WBC00074.1 | CBM42 , GH2 | 1 | 506 | 1 | 485 | 0.6009 |
0.6671 |
| A0A387HHJ8 | GT1 | 9 | 528 | 30 | 744 | 0.5941 |
0.7904 |
| A0A918L8E6 | GT2 | 10 | 537 | 1 | 547 | 0.5586 |
0.6428 |
| A0A3C1RID2 | GH17 | 6 | 537 | 6 | 646 | 0.5513 |
0.6673 |
| A0A7H8RF34 | CBM24 | 1 | 507 | 299 | 751 | 0.5419 |
0.757 |
| A0A9Q9RZ67 | GH78 | 1 | 536 | 736 | 1469 | 0.5286 |
0.7788 |
| A0A8H8MAC7 | CE16 | 4 | 531 | 55 | 736 | 0.5257 |
0.6308 |
| S5VEU6 | CE14 | 6 | 535 | 15 | 805 | 0.5248 |
0.6444 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 9 | 505 | 1 | 483 | 0.7616 |
0.8193 |
| 8pnl-assembly2.cif.gz_C | 9 | 505 | 1 | 485 | 0.7531 |
0.8103 |
| 7y58-assembly1.cif.gz_A | 3 | 506 | 5 | 503 | 0.7503 |
0.803 |
| 7d5p-assembly2.cif.gz_B | 24 | 506 | 1 | 413 | 0.7211 |
0.8293 |
| 7d5p-assembly1.cif.gz_A | 10 | 506 | 1 | 408 | 0.7201 |
0.8323 |
| 7d5q-assembly2.cif.gz_B | 24 | 506 | 1 | 411 | 0.7171 |
0.8267 |
| 7d5q-assembly1.cif.gz_A | 24 | 506 | 1 | 403 | 0.7137 |
0.8292 |
| 7bp3-assembly1.cif.gz_B | 20 | 527 | 1 | 394 | 0.7081 |
0.8303 |
| 6kkl-assembly1.cif.gz_A | 19 | 506 | 1 | 370 | 0.7076 |
0.852 |
| 8b1j-assembly1.cif.gz_A | 9 | 509 | 1 | 451 | 0.6985 |
0.7761 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 2 | 506 | 1 | 499 | 0.8149 |
0.8652 |
| AF-P0DPR7-F1-model_v4 | 5 | 505 | 3 | 509 | 0.8092 |
0.8605 |
| AF-P0AEJ0-F1-model_v4 | 1 | 506 | 1 | 501 | 0.8053 |
0.8586 |
| AF-P44927-F1-model_v4 | 1 | 506 | 2 | 505 | 0.8028 |
0.8505 |
| AF-P52600-F1-model_v4 | 1 | 506 | 2 | 505 | 0.8027 |
0.8517 |
| AF-P32369-F1-model_v4 | 2 | 511 | 2 | 476 | 0.7886 |
0.8547 |
| AF-O35018-F1-model_v4 | 1 | 503 | 6 | 473 | 0.7809 |
0.8598 |
| AF-Q8Y9K8-F1-model_v4 | 1 | 503 | 2 | 468 | 0.7807 |
0.8548 |
| AF-Q92EE1-F1-model_v4 | 1 | 503 | 2 | 468 | 0.7777 |
0.8519 |
| AF-P23054-F1-model_v4 | 8 | 509 | 4 | 458 | 0.7767 |
0.8591 |