PROTEIN: HRGMv2_0111_163_38
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Protein File & Metadata
Source:
HRGMv2_0111_163_38.pdb
Genome ID:
Protein ID:
HRGMv2_0111_163_38
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Protein Sequence
MSSYSSQSMT SLTHLVNAVN AWSGPALTQY GAERVELGGP VAGRWLAKIA HYLTNDLAAD 60 LFGTGEPTPA RFYTSLQPWQ DVLWQIAARA MGWEHLRTRN PLPGDLLITN TLTNESDDAL 120 NAGAHVLAQT PTYLSFAWEG TLGGALDALA QIATAPDTIT IPTPPILPAV RDDALEGTRA 180 TQDINGKRVA LLWDTHTGAG QVLDQWMAGR SVVIIDPQSI SPDQLPRIVT SEAVDAGLAL 240 YTR 243
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P96873-F1-model_v4 | 15 | 239 | 1 | 229 | 0.7342 |
0.7963 |
| AF-A0A044USL0-F1-model_v4 | 7 | 243 | 2 | 320 | 0.6562 |
0.7824 |
| AF-Q6P461-F1-model_v4 | 1 | 243 | 6 | 369 | 0.5651 |
0.7618 |
| AF-Q8ZRX4-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5504 |
0.7728 |
| AF-P31552-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5502 |
0.7726 |
| AF-Q32K60-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5493 |
0.7714 |
| AF-Q6NUN0-F1-model_v4 | 1 | 243 | 29 | 371 | 0.5373 |
0.7669 |
| AF-O80658-F1-model_v4 | 7 | 243 | 12 | 328 | 0.5362 |
0.768 |
| AF-I1LI90-F1-model_v4 | 8 | 243 | 7 | 336 | 0.5345 |
0.767 |
| AF-Q7TN78-F1-model_v4 | 3 | 243 | 32 | 371 | 0.5294 |
0.7615 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4lgc-assembly1.cif.gz_A | 1 | 243 | 2 | 299 | 0.5661 |
0.7112 |
| 3etc-assembly3.cif.gz_B | 2 | 243 | 1 | 349 | 0.5461 |
0.765 |
| 3etc-assembly2.cif.gz_A | 2 | 243 | 1 | 346 | 0.5456 |
0.7615 |
| 4g37-assembly1.cif.gz_A | 5 | 243 | 12 | 332 | 0.5422 |
0.7656 |
| 8eps-assembly3.cif.gz_C | 5 | 243 | 62 | 425 | 0.5287 |
0.7889 |
| 7kno-assembly1.cif.gz_B | 5 | 243 | 63 | 426 | 0.5244 |
0.7884 |
| 7knp-assembly1.cif.gz_B | 5 | 243 | 63 | 426 | 0.5236 |
0.7854 |
| 5e7q-assembly1.cif.gz_B | 7 | 243 | 2 | 315 | 0.5192 |
0.729 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P33585-F1-model_v4 | 7 | 242 | 22 | 284 | 0.6287 |
0.7421 |
| AF-Q0T8F7-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5552 |
0.7764 |
| AF-Q8GB18-F1-model_v4 | 6 | 243 | 4 | 321 | 0.5539 |
0.7782 |
| AF-Q0TLV2-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5524 |
0.7756 |
| AF-Q5PIL0-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5521 |
0.7749 |
| AF-B5BL55-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5518 |
0.775 |
| AF-B4T6J6-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5518 |
0.7746 |
| AF-B4EY25-F1-model_v4 | 6 | 243 | 4 | 321 | 0.5516 |
0.775 |
| AF-B1LFX0-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5514 |
0.7743 |
| AF-B7N7R2-F1-model_v4 | 6 | 243 | 4 | 320 | 0.5511 |
0.7737 |