PROTEIN: HRGMv2_0085_4_27
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Protein File & Metadata
Source:
HRGMv2_0085_4_27.pdb
Genome ID:
Protein ID:
HRGMv2_0085_4_27
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Protein Sequence
MNINQSSIEA FLSSWLPSQR WFLAPTNISD ESGDDITASS STCGDDLHGT STQKSSVSSS 60 LQAHITHLTV LAHDSDSAIL FLLVEAGANL YAVPIIHKLQ SAHSSAAAPI YIDATDTPEG 120 RAALLAAALT PSESANGIPH PAIFGESHED TQRSISCLRI HGTPLRETFH SLAKIVTSHK 180 LTSEQSNTSI IYRLADGRSI IVKLLRLVHP GINPDIELQC ALDNAGSAVV PAQYGYARAG 240 FSSASFDMPE PVSANHQYEY QADILTASEF LDGSVDAWQL ITSELSTSGN FPISAIAQLG 300 HTTRAMHTAL ASALPTAEPD GDARAVQLAS WRARAAQALD RVPELQPYAA RIEDIYTRAA 360 CSTWPQLQRI HGDFHLGQVL RVQGNSQHGT QKESAEGWRV IDFEGEPLRP LSERNKPDLA 420 LRDIAGMLRS LSYAAGFARK QGANSSLITE WENAARAEFL RAYGAEKSEL ANALILDKAL 480 YEVIYEAAYR PSWIDIPLCG ITEIMCEYT 509
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O07177-F1-model_v4 | 1 | 507 | 1 | 455 | 0.7964 |
0.85 |
| AF-X8F0G7-F1-model_v4 | 112 | 509 | 2 | 339 | 0.5942 |
0.7395 |
| AF-K0FE05-F1-model_v4 | 95 | 502 | 2 | 295 | 0.5915 |
0.7627 |
| AF-A0A150ASB9-F1-model_v4 | 16 | 509 | 10 | 347 | 0.588 |
0.7285 |
| AF-A0A1D8PTJ6-F1-model_v4 | 19 | 509 | 9 | 396 | 0.5752 |
0.6793 |
| AF-A0A0D2GD87-F1-model_v4 | 19 | 509 | 5 | 363 | 0.57 |
0.6926 |
| AF-U7PNE2-F1-model_v4 | 19 | 509 | 5 | 369 | 0.57 |
0.6929 |
| AF-C1H4B7-F1-model_v4 | 19 | 509 | 5 | 356 | 0.5688 |
0.6997 |
| AF-Q9I1W3-F1-model_v4 | 1 | 509 | 586 | 1096 | 0.5653 |
0.7753 |
| AF-K0F9E1-F1-model_v4 | 45 | 509 | 7 | 374 | 0.5624 |
0.673 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0S4VQ97-F1-model_v4 | GH13_16 | 1 | 509 | 81 | 648 | 0.693 |
0.7898 |
| AF-C7C8I9-F1-model_v4 | GH13_16 | 1 | 509 | 290 | 804 | 0.6373 |
0.7867 |
| AF-C5AUQ1-F1-model_v4 | GH13_16 | 1 | 509 | 326 | 840 | 0.6282 |
0.788 |
| AF-A0A516TLZ7-F1-model_v4 | GH13_16 | 1 | 509 | 249 | 782 | 0.6262 |
0.769 |
| AF-A0A2U9S7Z1-F1-model_v4 | GH13_16 | 1 | 509 | 579 | 1115 | 0.5809 |
0.8005 |
| AF-G7ZB39-F1-model_v4 | GH13_16 | 1 | 509 | 579 | 1119 | 0.5803 |
0.8013 |
| AF-A0A060DFF6-F1-model_v4 | GH13_16 | 1 | 509 | 579 | 1099 | 0.5793 |
0.7941 |
| AF-W6KAA6-F1-model_v4 | GH13_16 | 1 | 509 | 572 | 1096 | 0.5788 |
0.7927 |
| AF-A0A0P0F6P2-F1-model_v4 | GH13_16 | 1 | 509 | 586 | 1107 | 0.5781 |
0.7942 |
| AF-A0A4D8QYF8-F1-model_v4 | GH13_16 | 1 | 509 | 586 | 1107 | 0.5775 |
0.7934 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A853DH66 | CBM48 , GH13_9 | 1 | 509 | 3 | 479 | 0.5768 |
0.8705 |
| WGJ15073.1 | GH13_16 | 1 | 509 | 569 | 1082 | 0.5717 |
0.7806 |
| E8UY09 | GH13_16 | 1 | 509 | 575 | 1081 | 0.5706 |
0.7811 |
| A0A1Y0EHY5 | GH13_16 | 1 | 508 | 590 | 1093 | 0.5703 |
0.788 |
| A0A254QB99 | GH13_16 | 1 | 509 | 570 | 1100 | 0.568 |
0.7829 |
| A0A1H4UJZ1 | GH13_16 | 1 | 509 | 658 | 1171 | 0.5669 |
0.7933 |
| A0A3S6Z6X1 | GH13_16 | 1 | 509 | 571 | 1082 | 0.5663 |
0.7726 |
| A0A239VF88 | CBM48 , GH13_9 | 4 | 509 | 7 | 477 | 0.5659 |
0.8818 |
| A0A385STF4 | GH13_16 | 1 | 509 | 570 | 1103 | 0.5655 |
0.778 |
| C6XB31 | GH13_16 | 1 | 509 | 649 | 1190 | 0.5646 |
0.7946 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4u94-assembly1.cif.gz_A | 6 | 509 | 1 | 444 | 0.7957 |
0.8644 |
| 5jy7-assembly1.cif.gz_I | 7 | 504 | 1 | 435 | 0.7788 |
0.8481 |
| 5jy7-assembly2.cif.gz_M | 8 | 504 | 1 | 431 | 0.7782 |
0.8509 |
| 6hwk-assembly1.cif.gz_D | 2 | 507 | 1 | 416 | 0.7623 |
0.85 |
| 6hwk-assembly1.cif.gz_C | 1 | 506 | 1 | 408 | 0.7543 |
0.8483 |
| 4o7p-assembly1.cif.gz_A | 3 | 506 | 1 | 433 | 0.7513 |
0.8203 |
| 6hwl-assembly1.cif.gz_B | 3 | 509 | 1 | 393 | 0.7502 |
0.8605 |
| 6hwj-assembly2.cif.gz_B | 1 | 509 | 1 | 401 | 0.7482 |
0.8518 |
| 6hwk-assembly1.cif.gz_A | 1 | 509 | 1 | 412 | 0.7457 |
0.8358 |
| 6hwl-assembly1.cif.gz_A | 1 | 508 | 2 | 420 | 0.7453 |
0.8308 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0PWI9-F1-model_v4 | 1 | 509 | 1 | 455 | 0.803 |
0.8567 |
| AF-B2HLP4-F1-model_v4 | 1 | 509 | 1 | 455 | 0.8024 |
0.8562 |
| AF-C1AJF3-F1-model_v4 | 1 | 508 | 1 | 455 | 0.7983 |
0.8518 |
| AF-Q7U2S7-F1-model_v4 | 1 | 508 | 1 | 455 | 0.7982 |
0.8517 |
| AF-A1KEU8-F1-model_v4 | 1 | 508 | 1 | 455 | 0.798 |
0.8515 |
| AF-A5WII2-F1-model_v4 | 1 | 508 | 1 | 455 | 0.7977 |
0.8512 |
| AF-C6DQZ2-F1-model_v4 | 1 | 508 | 1 | 455 | 0.7977 |
0.8512 |
| AF-A5TYK2-F1-model_v4 | 1 | 508 | 2 | 455 | 0.7974 |
0.8529 |
| AF-Q7DAF6-F1-model_v4 | 1 | 508 | 2 | 455 | 0.7974 |
0.8528 |
| AF-Q73U39-F1-model_v4 | 4 | 507 | 1 | 452 | 0.7973 |
0.853 |