PROTEIN: HRGMv2_0014_1_102
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Protein File & Metadata
Source:
HRGMv2_0014_1_102.pdb
Genome ID:
Protein ID:
HRGMv2_0014_1_102
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Protein Sequence
MMRIQGKKWG SLLVAGFLLG ISVSGECAVP ATAAETIPAG SEAQLQKLVD LRLVTLPAGC 60 STVEAGHFTR GEMTDLILQA MERLGLDARG NCPVTEQSRP GMAETLALRN AFRKELENKG 120 MVDDPILLRG TKPSSEAGDE KKDEDRKYKF SAELRYDYER NSGNRRWDWM DSALRARLFV 180 EAKINDDWHA FGMGEINHHF THHRKRDDWM ENRRIYVKGK TGITTVTAGM YGLTLGEGNI 240 YSSTAKGASF AWGDRPRYEF SGGRTKANGD FASFGIKYDE EPRYYGAAVH YFGRDNWDQG 300 KRTIWDAYYN IDLTPQVQAG FMLLGADHAF GDGKYVGFVT RLSHGSIKSW IKGSQEWDLH 360 YYYQPSGTYI AHTMSGLADY MNGFKGLGFQ YQYTVIPNVV LNLEYYNLRE LATGDKGRTL 420 WLDVTYFMG 429
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37432-F1-model_v4 | 60 | 428 | 1 | 363 | 0.6149 |
0.6817 |
| AF-P02932-F1-model_v4 | 57 | 428 | 1 | 351 | 0.6148 |
0.6922 |
| AF-P30705-F1-model_v4 | 58 | 428 | 1 | 350 | 0.6119 |
0.6902 |
| AF-A0A0H3GIV3-F1-model_v4 | 57 | 428 | 1 | 350 | 0.6112 |
0.6893 |
| AF-P21420-F1-model_v4 | 57 | 428 | 2 | 365 | 0.6048 |
0.6711 |
| AF-P43839-F1-model_v4 | 57 | 428 | 7 | 359 | 0.6025 |
0.6802 |
| AF-P06996-F1-model_v4 | 57 | 428 | 1 | 367 | 0.6016 |
0.6644 |
| AF-A0A0H3H0Y2-F1-model_v4 | 57 | 428 | 1 | 367 | 0.6011 |
0.6639 |
| AF-Q8ZPH7-F1-model_v4 | 57 | 428 | 1 | 372 | 0.5957 |
0.6545 |
| AF-P77747-F1-model_v4 | 56 | 428 | 1 | 377 | 0.5943 |
0.6549 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0C7NJP3-F1-model_v4 | CBM48 | 46 | 428 | 14 | 424 | 0.4626 |
0.5287 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8bym-assembly1.cif.gz_A | 138 | 428 | 8 | 321 | 0.6966 |
0.8848 |
| 6ehe-assembly1.cif.gz_A | 144 | 428 | 1 | 302 | 0.6114 |
0.7684 |
| 6ehb-assembly1.cif.gz_B | 88 | 428 | 1 | 317 | 0.6044 |
0.7078 |
| 1gfn-assembly1.cif.gz_A | 130 | 428 | 1 | 327 | 0.5996 |
0.7526 |
| 5onu-assembly1.cif.gz_C | 88 | 429 | 1 | 320 | 0.5979 |
0.6975 |
| 6ehb-assembly1.cif.gz_C | 87 | 428 | 1 | 320 | 0.5942 |
0.6943 |
| 6ene-assembly1.cif.gz_C | 130 | 428 | 1 | 329 | 0.5941 |
0.748 |
| 1pho-assembly1.cif.gz_A | 130 | 428 | 1 | 330 | 0.5938 |
0.7487 |
| 1mpf-assembly1.cif.gz_A | 130 | 428 | 1 | 340 | 0.5904 |
0.755 |
| 3upg-assembly1.cif.gz_A | 130 | 428 | 1 | 311 | 0.5898 |
0.7226 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67297-F1-model_v4 | 113 | 428 | 1 | 309 | 0.6218 |
0.7345 |
| AF-Q47490-F1-model_v4 | 49 | 428 | 1 | 350 | 0.6191 |
0.6976 |
| AF-Q56113-F1-model_v4 | 39 | 428 | 1 | 363 | 0.6175 |
0.684 |
| AF-P37432-F1-model_v4 | 60 | 428 | 1 | 363 | 0.6149 |
0.6817 |
| AF-P02932-F1-model_v4 | 57 | 428 | 1 | 351 | 0.6148 |
0.6922 |
| AF-Q56119-F1-model_v4 | 57 | 428 | 1 | 350 | 0.6141 |
0.6923 |
| AF-Q87LZ1-F1-model_v4 | 58 | 428 | 2 | 337 | 0.6124 |
0.7013 |
| AF-P30705-F1-model_v4 | 58 | 428 | 1 | 350 | 0.6119 |
0.6902 |
| AF-A0A0H3N9T8-F1-model_v4 | 65 | 428 | 1 | 363 | 0.6108 |
0.6779 |
| AF-Q8DBX0-F1-model_v4 | 98 | 428 | 1 | 340 | 0.607 |
0.7088 |