PROTEIN: GibsonMK_2016_SRR3131894_bin.2_k141_752_2
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Protein File & Metadata
Source:
GibsonMK_2016_SRR3131894_bin.2_k141_752_2.pdb
Genome ID:
Protein ID:
GibsonMK_2016_SRR3131894_bin.2_k141_752_2
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Protein Sequence
MKKISNFCML LLLLCTTFFV FNINYTREVV RIQEMGKTAS SLDVYLKDVN EPAESVLRFF 60 EDVSKEYKVS IIKTDSGDEV IKSGVFDKDT FPYQEFGLSS LDFTTDGEGV YSNKEISNKL 120 GTIPTFLKAK PIQLMTFQTY IKDTSRSLNG RYTITSTQKM DKDRIVQKWS DFFNIDQATL 180 LEPNYKSAVE VLNRDLLLSA IIFVLAILLL VLVTVYQPMM EMKRVGVQKL LGFQDRAVLA 240 DVVKGNLYLL LGGALVINLG VCFLLDYKPK DLFPMLWLSH FLLLQLYLFI SWLTYLLIQK 300 MTISSLLKGF SSFKFGLLFN YLMKIGTTIL LTVLLVGVGK SLEQENKELD YQKQWISQGN 360 YLTLETFQLN DNLWQEQLAG SGQAVDYFYR FYQDLVEKTQ AGYVQTSNLP IKNFATAEQV 420 QQYQLADMLT VYYANRNFLK SKGFKLPDTG TKKVILMPAS TKGEEEKNQL LGKLITYQSM 480 KYEEQQKRRI EEVDVEIAYY EGDWSFFPYS DKRKENLYNP IISLVNDSDM MWDEKASLST 540 TGLNNPIKIE NTVQHQKEIT ELVEKLSDGN YLKFSSIQAI QQEKVDSYRD AVRNFNLLFA 600 LFGLLSMMIS YFLLVTTFLL KRTDIITKKF MGWKLIDRYR SLLGLLLAVY SLPFMALLFF 660 AHALFPPLLF AGFTGLDILF VLFLGSKMEK RNVVQLLKGD HL 702
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DRI8-F1-model_v4 | 1 | 702 | 1 | 702 | 0.9069 |
0.9193 |
| AF-Q8DND1-F1-model_v4 | 1 | 699 | 2 | 680 | 0.6438 |
0.6798 |
| AF-Q2FZN2-F1-model_v4 | 1 | 699 | 1 | 654 | 0.6357 |
0.6797 |
| AF-Q8DQM4-F1-model_v4 | 3 | 699 | 1 | 673 | 0.6274 |
0.6653 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.