PROTEIN: GasparriniAJ_2019_SRR9865738_bin.1_k141_3538_60
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Protein File & Metadata
Source:
GasparriniAJ_2019_SRR9865738_bin.1_k141_3538_60.pdb
Genome ID:
Protein ID:
GasparriniAJ_2019_SRR9865738_bin.1_k141_3538_60
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Protein Sequence
MKRLILTALD DNNKIWFENL ISFILSLRRT NYKGDIGIID YGLSEVKKIC LKEHDIKIFE 60 PTYGCKELLL DRHISAADIA QNYNYDQIAV YDCDIWFPSH HLDIFEQIKN EKNLYATYDA 120 WRCTFLDNCV ESESKKTVSA KIDAVVSKNG YVWQAGLILG STEAWLLYKQ YVEEQMNIKN 180 YLKPVYGIDA SLFNLYAQDS EKVSFIHQKY NCPPVWGIEL KHDEGNFAPL VKGEFVQGIH 240 ITRNHRNDKM LAYPYVFESY YHQEGKKFNL RENKIFNIIK SSLTCYPPAK ENLTLELTQA 300 NANGGHFSSV ISQSDDVYKK GCLMLAVSGD SSFTLKNTHN HPVRLVFFCE KIIGFGACLS 360 TFFIRENGEK FSPELQSLYY VDLVSNEEIQ FCTKELDVEG KRIRWVFDNL RLI 413
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z517-F1-model_v4 | 1 | 403 | 6 | 285 | 0.614 |
0.7503 |
| AF-A0A132Z6Q5-F1-model_v4 | 1 | 329 | 4 | 285 | 0.5907 |
0.7359 |
| AF-O24967-F1-model_v4 | 1 | 407 | 3 | 361 | 0.5836 |
0.649 |
| AF-P43974-F1-model_v4 | 1 | 375 | 37 | 319 | 0.5778 |
0.7522 |
| AF-Q329M8-F1-model_v4 | 1 | 404 | 28 | 330 | 0.5642 |
0.6986 |
| AF-Q6IQP1-F1-model_v4 | 1 | 376 | 3 | 314 | 0.5642 |
0.6648 |
| AF-Q329M9-F1-model_v4 | 1 | 402 | 21 | 323 | 0.5617 |
0.6895 |
| AF-P19816-F1-model_v4 | 1 | 404 | 25 | 329 | 0.5612 |
0.6899 |
| AF-P46976-F1-model_v4 | 1 | 379 | 1 | 310 | 0.5595 |
0.6902 |
| AF-O45819-F1-model_v4 | 1 | 376 | 1 | 281 | 0.5593 |
0.6992 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7G9NZ95-F1-model_v4 | GT8 | 2 | 398 | 1 | 276 | 0.6184 |
0.7541 |
| AF-E8RMC2-F1-model_v4 | GT8 | 1 | 375 | 2 | 282 | 0.5953 |
0.7531 |
| WGE30131.1 | GT6 | 1 | 356 | 1 | 236 | 0.5885 |
0.7704 |
| AF-A0A1U9KJZ2-F1-model_v4 | GT8 | 1 | 375 | 2 | 282 | 0.5876 |
0.7582 |
| AF-A0A7R7YE13-F1-model_v4 | GT8 | 1 | 375 | 2 | 282 | 0.5868 |
0.75 |
| AF-A0A6S6PG04-F1-model_v4 | GT8 | 1 | 375 | 2 | 282 | 0.5842 |
0.7536 |
| AF-I4ERC7-F1-model_v4 | GT8 | 1 | 375 | 3 | 283 | 0.5838 |
0.75 |
| AF-B0UVK9-F1-model_v4 | GT6 | 1 | 400 | 3 | 255 | 0.5703 |
0.7294 |
| AF-A0A0H3IBW6-F1-model_v4 | GT8 | 1 | 401 | 21 | 326 | 0.5562 |
0.6816 |
| A0A9W3VW74 | GT6 | 1 | 376 | 7 | 261 | 0.5452 |
0.723 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| E8RMC2 | GT8 | 1 | 375 | 2 | 282 | 0.5953 |
0.7531 |
| A0A7L5A436 | GT8 | 1 | 375 | 6 | 285 | 0.5888 |
0.7579 |
| WGE30131.1 | GT6 | 1 | 356 | 1 | 236 | 0.5885 |
0.7704 |
| A0A7R7YE13 | GT8 | 1 | 375 | 2 | 282 | 0.5868 |
0.75 |
| A0A6S6PG04 | GT8 | 1 | 375 | 2 | 282 | 0.5842 |
0.7536 |
| I4ERC7 | GT8 | 1 | 375 | 3 | 283 | 0.5838 |
0.75 |
| D5U7X6 | GT8 | 1 | 377 | 2 | 275 | 0.5795 |
0.7847 |
| A0A248ULZ7 | GT8 | 1 | 397 | 9 | 304 | 0.5721 |
0.6869 |
| E1SW53 | GT8 | 1 | 376 | 4 | 325 | 0.5677 |
0.6775 |
| UDG81348.1 | GT8 | 1 | 378 | 27 | 322 | 0.559 |
0.712 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7zxw-assembly1.cif.gz_A | 1 | 274 | 1 | 283 | 0.6163 |
0.765 |
| 5y7f-assembly1.cif.gz_A | 1 | 274 | 1 | 267 | 0.6161 |
0.76 |
| 4ueg-assembly1.cif.gz_A-2 | 1 | 274 | 1 | 242 | 0.6128 |
0.7839 |
| 3tzt-assembly1.cif.gz_B | 2 | 267 | 1 | 231 | 0.6116 |
0.7953 |
| 3tzt-assembly1.cif.gz_A | 1 | 267 | 1 | 234 | 0.6088 |
0.7882 |
| 4ueg-assembly1.cif.gz_B-2 | 1 | 272 | 1 | 249 | 0.5997 |
0.7592 |
| 6eqj-assembly1.cif.gz_A-2 | 1 | 268 | 1 | 245 | 0.5982 |
0.762 |
| 3rmv-assembly1.cif.gz_A-2 | 1 | 272 | 2 | 249 | 0.5957 |
0.757 |
| 3q4s-assembly1.cif.gz_A-2 | 1 | 272 | 2 | 251 | 0.5948 |
0.7534 |
| 6eql-assembly1.cif.gz_A | 1 | 269 | 1 | 255 | 0.5943 |
0.7459 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P25148-F1-model_v4 | 1 | 404 | 5 | 286 | 0.6148 |
0.7478 |
| AF-O31542-F1-model_v4 | 1 | 362 | 1 | 311 | 0.5913 |
0.6887 |
| AF-P43974-F1-model_v4 | 1 | 375 | 37 | 319 | 0.5778 |
0.7522 |
| AF-P19817-F1-model_v4 | 1 | 401 | 24 | 324 | 0.5632 |
0.6981 |
| AF-P19816-F1-model_v4 | 1 | 404 | 25 | 329 | 0.5612 |
0.6899 |
| AF-Q947G8-F1-model_v4 | 1 | 357 | 17 | 318 | 0.5597 |
0.6734 |
| AF-P46976-F1-model_v4 | 1 | 379 | 1 | 310 | 0.5595 |
0.6902 |
| AF-P27128-F1-model_v4 | 1 | 401 | 27 | 328 | 0.557 |
0.6932 |
| AF-Q2HJ96-F1-model_v4 | 1 | 403 | 48 | 350 | 0.5539 |
0.6986 |
| AF-Q640P4-F1-model_v4 | 1 | 375 | 49 | 349 | 0.5526 |
0.7001 |