PROTEIN: GasparriniAJ_2019_SRR9865555_bin.9_k141_21865_27
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Protein File & Metadata
Source:
GasparriniAJ_2019_SRR9865555_bin.9_k141_21865_27.pdb
Genome ID:
Protein ID:
GasparriniAJ_2019_SRR9865555_bin.9_k141_21865_27
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Protein Sequence
MHVFNSRADF DAQMKSVKKW MRTGQALDGV ADLQHDVAYS IGDSLVYWWV YAREAATADL 60 VGHRRYHAVL APLDGDLTVE VAPKAGLTCT RAYSDIDDRE RFEGAGETVT IPAGGVAVVE 120 IDEAYRVIAE ASDPRVVVLH VTVEGYSFPN K 151
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.8975 |
0.9599 |
| AF-Q8CYF8-F1-model_v4 | 1 | 144 | 1 | 150 | 0.8099 |
0.8761 |
| AF-P45424-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8096 |
0.8709 |
| AF-Q32BB8-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8078 |
0.8693 |
| AF-Q8ZLQ9-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8049 |
0.8689 |
| AF-O25673-F1-model_v4 | 1 | 150 | 2 | 178 | 0.7974 |
0.8931 |
| AF-Q8ZL82-F1-model_v4 | 1 | 146 | 1 | 154 | 0.7931 |
0.8602 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7893 |
0.8541 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.777 |
0.8482 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4tsd-assembly1.cif.gz_A | 1 | 150 | 1 | 177 | 0.7894 |
0.8872 |
| 1s4c-assembly1.cif.gz_A | 1 | 146 | 1 | 150 | 0.7811 |
0.841 |
| 1s4c-assembly2.cif.gz_C | 1 | 146 | 1 | 147 | 0.7735 |
0.8249 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC74-F1-model_v4 | 1 | 145 | 1 | 143 | 0.8979 |
0.9602 |
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.8975 |
0.9599 |
| AF-P45424-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8096 |
0.8709 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7893 |
0.8541 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.777 |
0.8482 |