PROTEIN: GasparriniAJ_2019_SRR9865541_bin.10_k141_34683_15
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Protein File & Metadata
Source:
GasparriniAJ_2019_SRR9865541_bin.10_k141_34683_15.pdb
Genome ID:
Protein ID:
GasparriniAJ_2019_SRR9865541_bin.10_k141_34683_15
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Protein Sequence
MKKFLYVFNY PPEDKDLCAL EFRAMFKQEY ISKYYLSNKD YDVNKSVFMK AKIDIWGINQ 60 DFYKLVKQIT SLNKCYQDFK IIYLKNEITH VEYEETLQKC KEISWAIEGS VNMSKPLHTI 120 AITKFNNVWL CGYYHHGIPS WKKHDYKPHT FSNSLDIRLA RTLVNIAVSD SKEIKIVDPC 180 CGMATVVLEG LALGIDIEGY DISREISWAA RKNLRYFGYD ESLINRTSIH DLNKHYDVAI 240 LDIPYNLYTP ITYDEQCKII ESARKICDKM IIVTFEDMTK EINQAGFSIV DSCLRKKTEY 300 VKFGRYIYVC V 311
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58120-F1-model_v4 | 3 | 311 | 1 | 349 | 0.7623 |
0.834 |
| AF-A0A044STT5-F1-model_v4 | 1 | 311 | 1 | 406 | 0.6973 |
0.8291 |
| AF-A0A0K0JQM4-F1-model_v4 | 1 | 311 | 4 | 413 | 0.6933 |
0.8295 |
| AF-A0A7I4KPK8-F1-model_v4 | 1 | 311 | 12 | 421 | 0.6903 |
0.8312 |
| AF-Q9N4H1-F1-model_v4 | 1 | 311 | 1 | 400 | 0.6861 |
0.8132 |
| AF-A0A0K0DWI4-F1-model_v4 | 1 | 311 | 1 | 410 | 0.6799 |
0.8125 |
| AF-Q9CWH5-F1-model_v4 | 1 | 311 | 7 | 411 | 0.6712 |
0.8143 |
| AF-Q7TNK6-F1-model_v4 | 1 | 311 | 7 | 411 | 0.6699 |
0.8151 |
| AF-A0A175WAV8-F1-model_v4 | 1 | 311 | 1 | 408 | 0.6641 |
0.799 |
| AF-F1R1R2-F1-model_v4 | 1 | 311 | 9 | 414 | 0.6636 |
0.809 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5e72-assembly1.cif.gz_A | 3 | 311 | 1 | 322 | 0.8044 |
0.8473 |
| 6zxy-assembly1.cif.gz_B | 1 | 311 | 5 | 319 | 0.7998 |
0.8349 |
| 6zxw-assembly1.cif.gz_G | 1 | 311 | 1 | 319 | 0.7886 |
0.8243 |
| 1ne2-assembly1.cif.gz_B | 43 | 311 | 1 | 180 | 0.6129 |
0.7993 |
| 1wy7-assembly2.cif.gz_B | 9 | 311 | 1 | 195 | 0.6082 |
0.7678 |
| 1wy7-assembly1.cif.gz_A | 18 | 311 | 1 | 193 | 0.606 |
0.7679 |
| 1wy7-assembly3.cif.gz_C | 7 | 311 | 1 | 195 | 0.6027 |
0.767 |
| 1wy7-assembly4.cif.gz_D | 7 | 311 | 1 | 201 | 0.5994 |
0.7469 |
| 3tma-assembly1.cif.gz_A | 1 | 311 | 1 | 330 | 0.5992 |
0.6516 |
| 6h2u-assembly1.cif.gz_A | 42 | 311 | 1 | 199 | 0.5989 |
0.751 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9UY84-F1-model_v4 | 3 | 311 | 1 | 327 | 0.815 |
0.8649 |
| AF-O29011-F1-model_v4 | 2 | 311 | 1 | 319 | 0.8022 |
0.8392 |
| AF-O26820-F1-model_v4 | 2 | 311 | 1 | 334 | 0.8005 |
0.8552 |
| AF-Q58120-F1-model_v4 | 3 | 311 | 1 | 349 | 0.7623 |
0.834 |
| AF-Q9CWH5-F1-model_v4 | 1 | 311 | 7 | 411 | 0.6712 |
0.8143 |
| AF-Q7TNK6-F1-model_v4 | 1 | 311 | 7 | 411 | 0.6699 |
0.8151 |
| AF-Q6YJI5-F1-model_v4 | 1 | 311 | 8 | 412 | 0.6677 |
0.811 |
| AF-Q7Z4G4-F1-model_v4 | 1 | 311 | 6 | 414 | 0.6625 |
0.8061 |
| AF-Q6NS23-F1-model_v4 | 1 | 311 | 11 | 414 | 0.6536 |
0.8044 |
| AF-O94636-F1-model_v4 | 1 | 311 | 1 | 420 | 0.6514 |
0.7962 |