PROTEIN: GasparriniAJ_2019_SRR9865541_bin.10_k141_27558_12
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Protein File & Metadata
Source:
GasparriniAJ_2019_SRR9865541_bin.10_k141_27558_12.pdb
Genome ID:
Protein ID:
GasparriniAJ_2019_SRR9865541_bin.10_k141_27558_12
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Protein Sequence
MYDYCISTVF FSLLIIFFYC LGSVIVSEKN SIPYRFICGY LFYSFIIAIG GIIIQLLNLS 60 WYLFFGYTIL TVIALLIFIV YRSKKEKIRL FPIGVKEFLK KYWFLFIISG ILIVISLAYS 120 EWIWLNNCLD DGFYLNKIAT LPYIENPFTT NASTGLVEIQ NGFNSYIVNT GELEMSVYVF 180 LLQVTPTVFT RVFLSGYNYF LFACCIYAFA EKIIKSTSIK CSENTIQYIA SIILLFGFSW 240 NFMEVKEILY VQDSWQFNTA MYYASSIVRT MGILIILVHF IENNKISIRD ILLVILISVV 300 LVSKSTIALP IIFVTCVSYL VVNFLFDDKY LKKILSIIIL VLIGIIGLII GGNDYIEELV 360 RNLFLKNMKF YLVIGCLIII ALSFTFKSKV INKVNLIMLI ILFLMESPII NNLFEKLSVY 420 DFVAARASTT YMYTFVIVTM IYVYLFINKF KYSKKIIIPI YLVATMMLSL VSLYSYNNYN 480 GKLLTSYKIM YNNRKIIPDS TIMLGNKLSD LADDVEEEIN MIMPEGVMVD GHLHSIAIII 540 RSFAPEIRSI SAIGRFKVSE GNDFSNFTSD DQAKLDAFIT NPTKENKHNL KILLEEYPIN 600 CIVLPTAEDN EYLYEIGFDS YTKFSDIEGN ISYNIYYRAL Q 641
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6B8VUZ6-F1-model_v4 | GT85 | 24 | 641 | 13 | 665 | 0.5529 |
0.599 |
| AF-A0A0B6TIL9-F1-model_v4 | GT85 | 24 | 641 | 14 | 665 | 0.5502 |
0.597 |
| A0A8J9TEJ9 | GT22 | 29 | 637 | 1 | 578 | 0.5439 |
0.5928 |
| A0A0F0L4U4 | GT83 | 29 | 636 | 6 | 489 | 0.5393 |
0.6314 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8J9TEJ9 | GT22 | 29 | 637 | 1 | 578 | 0.5439 |
0.5928 |
| A0A0F0L4U4 | GT83 | 29 | 636 | 6 | 489 | 0.5393 |
0.6314 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P55583-F1-model_v4 | 1 | 639 | 5 | 662 | 0.6814 |
0.7129 |