PROTEIN: CokerMO_2019_SRR8692240_bin.20_k141_34707_70
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692240_bin.20_k141_34707_70.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692240_bin.20_k141_34707_70
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Protein Sequence
MKGRITFTSS NDKLNRGFAW AKEQALSYSH EGDLVGDWYE AALPGRMSFC IRDVAHHAVG 60 AEMLGLRGHT KNMLRRFVQN IAKSRQYCTF WEIDRDYRPC PVDYASDEDF WYNLPANFEL 120 LDVCFRMYML TGDSDYILDE DFVRFYDWTI RQYAAWWDQD GDFLLERKYP NSRLGIPSYC 180 EDDRFENAEA LVDMLAIEIR GYRSAAEIYR LRGEKEAEKM CVYRAESLQK MLEEQWWDES 240 EETFYQVKEN GGKLSHSPEM GHGLSLLYYN VIEDKHKRSC HTETLHNYSV ENRACVNVES 300 MSHYPELFFR LGEDEKAYYW LKEMIDPELV RREYPEVSYA AVGNYICGIA GIHVNAPAKE 360 VTIAPALAEE AEWFEITNCP MLDGEADIVM KDGKITFGNR TEQNISVNGK IVEPGAVLTV 420 EA 422
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1C1CXE3-F1-model_v4 | 1 | 421 | 1 | 453 | 0.7546 |
0.7998 |
| AF-A0A1C1CEE8-F1-model_v4 | 1 | 422 | 97 | 545 | 0.689 |
0.7898 |
| AF-A0A1C1CTY2-F1-model_v4 | 1 | 422 | 25 | 680 | 0.663 |
0.8262 |
| AF-A0JMP0-F1-model_v4 | 1 | 422 | 192 | 638 | 0.6538 |
0.8041 |
| AF-D3ZY02-F1-model_v4 | 1 | 422 | 236 | 680 | 0.6378 |
0.8023 |
| AF-Q8BP56-F1-model_v4 | 1 | 422 | 236 | 680 | 0.6371 |
0.7987 |
| AF-Q54KX5-F1-model_v4 | 1 | 422 | 264 | 701 | 0.6347 |
0.8048 |
| AF-Q32M88-F1-model_v4 | 1 | 422 | 237 | 681 | 0.6253 |
0.8023 |
| AF-X8FBP7-F1-model_v4 | 1 | 421 | 225 | 722 | 0.6241 |
0.7965 |
| AF-A0A096RVL5-F1-model_v4 | 5 | 356 | 36 | 529 | 0.6224 |
0.8432 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5C1QDR7-F1-model_v4 | GH63 | 1 | 422 | 4 | 471 | 0.7893 |
0.8466 |
| AF-E0RRP5-F1-model_v4 | GH63 | 1 | 422 | 3 | 471 | 0.785 |
0.8427 |
| AF-G0GG46-F1-model_v4 | GH63 | 1 | 422 | 3 | 471 | 0.7849 |
0.8426 |
| AF-F8EY29-F1-model_v4 | GH63 | 1 | 422 | 3 | 474 | 0.7824 |
0.8422 |
| AF-E1R8A1-F1-model_v4 | GH63 | 1 | 422 | 8 | 479 | 0.7821 |
0.8454 |
| AF-A0A0B7GWX5-F1-model_v4 | GH63 | 1 | 422 | 3 | 476 | 0.7819 |
0.8436 |
| AF-S5ZKY4-F1-model_v4 | GH63 | 1 | 422 | 3 | 477 | 0.7817 |
0.844 |
| AF-G8QYV7-F1-model_v4 | GH63 | 1 | 422 | 2 | 474 | 0.7811 |
0.8412 |
| AF-F0RZU5-F1-model_v4 | GH63 | 1 | 422 | 2 | 474 | 0.7809 |
0.8411 |
| AF-A0A650EPS7-F1-model_v4 | GH63 | 1 | 422 | 3 | 476 | 0.7806 |
0.8423 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WGQ08872.1 | GH78 | 1 | 422 | 6 | 418 | 0.8015 |
0.8383 |
| E1R8A1 | GH63 | 1 | 422 | 8 | 479 | 0.7821 |
0.8454 |
| A1QZG9 | GH63 | 1 | 422 | 14 | 485 | 0.7699 |
0.8372 |
| A0A1D7QBQ1 | GH78 | 17 | 422 | 1 | 397 | 0.7608 |
0.8099 |
| A0A160SYC4 | GH63 | 1 | 422 | 33 | 501 | 0.7606 |
0.8401 |
| UCS91658.1 | GH63 | 1 | 422 | 37 | 531 | 0.755 |
0.8533 |
| WFB36967.1 | GH63 | 1 | 422 | 8 | 478 | 0.7473 |
0.809 |
| A0A0S2JHJ9 | GH63 | 1 | 422 | 55 | 530 | 0.7343 |
0.8312 |
| A0A6C0G319 | GH63 | 1 | 421 | 54 | 532 | 0.7329 |
0.8394 |
| A0A7L8AIH8 | GH63 | 1 | 421 | 56 | 559 | 0.7309 |
0.8457 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5z73-assembly1.cif.gz_B | 15 | 356 | 1 | 425 | 0.6812 |
0.8503 |
| 5z74-assembly1.cif.gz_B | 15 | 356 | 1 | 430 | 0.6806 |
0.8537 |
| 5z74-assembly1.cif.gz_A | 15 | 356 | 1 | 439 | 0.6728 |
0.852 |
| 8hmm-assembly1.cif.gz_A | 1 | 422 | 154 | 639 | 0.6692 |
0.8138 |
| 6ttj-assembly1.cif.gz_D | 16 | 356 | 1 | 436 | 0.6688 |
0.8485 |
| 5goq-assembly1.cif.gz_A-2 | 19 | 356 | 1 | 435 | 0.6687 |
0.8525 |
| 7vma-assembly1.cif.gz_A | 1 | 400 | 190 | 620 | 0.6534 |
0.8256 |
| 3cih-assembly1.cif.gz_A | 1 | 422 | 281 | 712 | 0.6408 |
0.8111 |
| 4zlf-assembly1.cif.gz_A | 1 | 422 | 307 | 784 | 0.6144 |
0.8048 |
| 6w0p-assembly2.cif.gz_D | 1 | 422 | 214 | 671 | 0.6138 |
0.7645 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94250-F1-model_v4 | 1 | 422 | 3 | 474 | 0.7776 |
0.8373 |
| AF-A0JMP0-F1-model_v4 | 1 | 422 | 192 | 638 | 0.6538 |
0.8041 |
| AF-F1NZI4-F1-model_v4 | 1 | 422 | 247 | 689 | 0.6377 |
0.8041 |
| AF-Q8BP56-F1-model_v4 | 1 | 422 | 236 | 680 | 0.6371 |
0.7987 |
| AF-Q54KX5-F1-model_v4 | 1 | 422 | 264 | 701 | 0.6347 |
0.8048 |
| AF-Q32M88-F1-model_v4 | 1 | 422 | 237 | 681 | 0.6253 |
0.8023 |
| AF-Q9CID5-F1-model_v4 | 1 | 422 | 283 | 768 | 0.6193 |
0.8056 |
| AF-Q7S0S2-F1-model_v4 | 1 | 422 | 314 | 790 | 0.6136 |
0.8057 |
| AF-D6XZ22-F1-model_v4 | 1 | 422 | 279 | 761 | 0.6127 |
0.7943 |
| AF-Q9SW48-F1-model_v4 | 6 | 356 | 96 | 550 | 0.6123 |
0.8444 |