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PROTEIN: CokerMO_2019_SRR8692240_bin.20_k141_34707_67

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Protein File & Metadata
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Source:
CokerMO_2019_SRR8692240_bin.20_k141_34707_67.pdb
Genome ID:
CokerMO_2019_SRR8692240_bin.20
Protein ID:
CokerMO_2019_SRR8692240_bin.20_k141_34707_67

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKKRVISVL   VATALTASML   AGCGGGSEKT   TEKKESTFKG   SGEVNRFGWE   KPEETLKIDV 60
LDASGYYAPL   EAQKEGEKNS   LKYLKDEFNV   EINVEHVSGD   GKEALNLALA   SGDYPDVITY 120
VPFSMVEKFA   KMGKAVELTP   YMDTVGTDIK   KSMGEHYNLF   LDDKEKLYYV   PTLMGAITEL 180
PDRCAHIRYD   EWKAIGSPEI   KTPEDYYNAL   NAILEKFPKT   PNGEDRYALS   FYSDSGHYTD 240
PAALSGFWGL   KSGYKIDDDG   NFTHWAFTDE   GKEMTKYFNQ   YHLDGTLDPD   SFANNYEQWQ 300
TKFSNERVVG   CVGEWWITYQ   SGHEIWQAED   PNLPEDKRFV   QIGFKDEDAE   SANLSGKNFL 360
GSYCTIITDK   AEDPEAIMRF   MNFQATDMGT   ALTGWGIPNG   TPIGDTGEEV   KFWNIDEEGN 420
WEVDPEAKEQ   ILAEKWSYDN   AYYEEGMPWL   FVNQSRWEDG   VHDLWPNQMW   YDENKWKSMM 480
MENLDGTIYD   SSALTLREKT   DEQKIAEQSV   TDAWKANWGD   AVMADNDKEF   EAAWKKLQDS 540
LTSAGVDTLE   QAMSDNYKKN   MEKMETK 567
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 1 563 8 502 0.7204 0.792
AF-A0A133D019-F1-model_v4 13 563 15 485 0.615 0.6983
AF-Q8DNU8-F1-model_v4 53 555 36 440 0.5864 0.7265
AF-A0A132ZDH4-F1-model_v4 53 546 27 427 0.5779 0.7108
AF-K0EWS9-F1-model_v4 28 555 37 463 0.5767 0.6976
AF-K0F002-F1-model_v4 21 552 31 439 0.5751 0.706
AF-Q8DNU2-F1-model_v4 24 555 20 445 0.5747 0.6844
AF-A0A0H3GHK7-F1-model_v4 53 558 18 431 0.5719 0.6921
AF-Q8DNH8-F1-model_v4 55 555 31 419 0.5702 0.7141
AF-A0A133CDW9-F1-model_v4 55 555 42 444 0.5664 0.7074
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 32 566 35 506 0.6509 0.7527
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 556 17 797 0.4723 0.5703
A0A9Q8PNJ5 GH4 1 555 112 866 0.4507 0.5608
AF-A0A7U1BNH7-F1-model_v4 GH10 54 558 26 741 0.4417 0.5629
AF-A0A1B0VLS2-F1-model_v4 CBM0 53 567 541 967 0.4354 0.7033
A0A242CSU4 CBM35 55 567 573 998 0.4284 0.7005
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 32 566 35 506 0.6509 0.7527
A0A1Q2TKJ3 GH49 1 556 17 797 0.4723 0.5703
A0A9Q8PNJ5 GH4 1 555 112 866 0.4507 0.5608
A0A7U1BNH7 GH10 54 558 26 741 0.4417 0.5629
A0A242CSU4 CBM35 55 567 573 998 0.4284 0.7005
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g5y-assembly1.cif.gz_A 54 567 1 494 0.7661 0.8349
6fth-assembly1.cif.gz_A 53 565 1 496 0.7281 0.7936
3omb-assembly1.cif.gz_A 54 562 5 503 0.7274 0.7934
5xs8-assembly1.cif.gz_A 57 561 1 474 0.6835 0.7634
4tqu-assembly1.cif.gz_Q 43 566 1 491 0.6784 0.7479
5h6u-assembly1.cif.gz_A 49 566 1 487 0.6764 0.7474
5g62-assembly2.cif.gz_B 57 567 1 491 0.6764 0.746
6jhx-assembly2.cif.gz_B 43 563 1 483 0.6731 0.7464
3vlw-assembly2.cif.gz_B 43 565 1 489 0.6707 0.7407
5suo-assembly1.cif.gz_A 55 566 1 451 0.6359 0.7266
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 34 567 34 538 0.7417 0.8253
AF-Q795R2-F1-model_v4 36 562 32 498 0.7211 0.8313
AF-P37966-F1-model_v4 39 562 29 502 0.7004 0.8014
AF-O31518-F1-model_v4 40 552 25 427 0.6053 0.7414
AF-Q8FVS7-F1-model_v4 55 552 23 411 0.5941 0.7372
AF-Q578M8-F1-model_v4 54 552 22 411 0.5931 0.7342
AF-Q2YKZ9-F1-model_v4 55 552 22 411 0.5927 0.7338
AF-Q00749-F1-model_v4 54 555 33 420 0.5755 0.7231
AF-Q9K491-F1-model_v4 34 552 27 423 0.5734 0.711
AF-Q53684-F1-model_v4 37 552 23 423 0.5696 0.717
Download Full SwissProt Results