PROTEIN: CokerMO_2019_SRR8692240_bin.20_k141_30958_8
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692240_bin.20_k141_30958_8.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692240_bin.20_k141_30958_8
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Protein Sequence
MKKIVKTIIM ILLMVAVGAV HAYGQWKQPV YDTTVDAAEY QNVGEISGEA KIEQEFTAEY 60 NGMNALFIRT STWGRVNDSE MNYRLVNTAD DSVITEGVLK VSEVTDNEYK EITFPEVKES 120 KGEQYRFTIV SDGIKNGEGI SIFTTKKAES AESLEVNGEE QDQALVMKVQ AKEFNWEDFI 180 VLIGLQLYVV GFVKLLYRFL K 201
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0E3QJR3-F1-model_v4 | GT2 | 1 | 200 | 55 | 735 | 0.4433 |
0.7188 |
| AF-R4K848-F1-model_v4 | GT0 , GT2 | 1 | 175 | 329 | 925 | 0.4268 |
0.8205 |
| AF-D2RDR5-F1-model_v4 | GT2 | 1 | 192 | 427 | 1041 | 0.4091 |
0.7416 |
| AF-A0A1S8M8R4-F1-model_v4 | GT2 , GT4 | 2 | 174 | 526 | 943 | 0.4091 |
0.7983 |
| AF-Q97GN9-F1-model_v4 | GT0 , GT2 | 17 | 174 | 542 | 942 | 0.4023 |
0.8577 |
| AF-A0A0H3J786-F1-model_v4 | GT0 , GT2 | 21 | 176 | 788 | 940 | 0.4019 |
0.8831 |
| AF-A0A0E3PHH4-F1-model_v4 | GT2 | 1 | 201 | 275 | 1082 | 0.3996 |
0.6948 |
| AF-A0A0E3L941-F1-model_v4 | GT2 | 23 | 201 | 429 | 1066 | 0.3921 |
0.7547 |
| A0A8D5AL96 | GT2 , GT4 | 39 | 201 | 8 | 903 | 0.3851 |
0.7779 |
| AF-A0A0E3PR73-F1-model_v4 | GT2 | 21 | 201 | 412 | 1061 | 0.3842 |
0.7277 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D2RDR5 | GT2 | 1 | 192 | 427 | 1041 | 0.4091 |
0.7416 |
| A0A0E3L941 | GT2 | 23 | 201 | 429 | 1066 | 0.3921 |
0.7547 |
| A0A8D5AL96 | GT2 , GT4 | 39 | 201 | 8 | 903 | 0.3851 |
0.7779 |
| A0A0E3PR73 | GT2 | 21 | 201 | 412 | 1061 | 0.3842 |
0.7277 |
| A0A2P8MIG1 | GT0 , GT2 | 34 | 176 | 791 | 946 | 0.3784 |
0.8846 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8h2i-assembly1.cif.gz_bG | 1 | 173 | 57 | 360 | 0.4273 |
0.7041 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.