PROTEIN: CokerMO_2019_SRR8692236_bin.2_k141_5690_108
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692236_bin.2_k141_5690_108.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692236_bin.2_k141_5690_108
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Protein Sequence
MHVFNSRVDF DAQMKSVKKW MRTGQALDGV ADLQHDVAYS IGDSLVYWWV YAREAATADL 60 VGHRRYHAVL APLDGDLTVE VASKADLTCT RTYSDIDDRE RFEGMGETVT IPAGGVAVVE 120 VDEAYRVVAD VADSRVVVLH VTVEGYSFPN K 151
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.9018 |
0.9637 |
| AF-Q8CYF8-F1-model_v4 | 1 | 144 | 1 | 150 | 0.8113 |
0.8777 |
| AF-O25673-F1-model_v4 | 1 | 150 | 2 | 178 | 0.7959 |
0.8916 |
| AF-Q8ZL82-F1-model_v4 | 1 | 146 | 1 | 154 | 0.7915 |
0.8588 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7874 |
0.8526 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7763 |
0.8479 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4tsd-assembly1.cif.gz_A | 1 | 150 | 1 | 177 | 0.7872 |
0.885 |
| 1s4c-assembly1.cif.gz_A | 1 | 146 | 1 | 150 | 0.7806 |
0.8408 |
| 1s4c-assembly2.cif.gz_C | 1 | 146 | 1 | 147 | 0.7733 |
0.8246 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC74-F1-model_v4 | 1 | 145 | 1 | 143 | 0.9023 |
0.964 |
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.9018 |
0.9637 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7874 |
0.8526 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7763 |
0.8479 |