PROTEIN: CokerMO_2019_SRR8692231_bin.5_k141_36721_9
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692231_bin.5_k141_36721_9.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692231_bin.5_k141_36721_9
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Protein Sequence
MEKLIYSKYS NERSRRFSLR TDILEQDGVR IVRKTPAGKE GEAHVASLAK WREELEKAFQ 60 ASPFVCNKCT LEGKSAVLEY VSGETLEERL DSLLKQGKKE EAEKLLTGYL TEIEKIYKGR 120 IFETTEEFTK VFGETVFFQE MECADVTDID MVCQNLVLTN PPVVLDYEWT FDFPVPGKFV 180 LYRVIHYYIR TNPMREALDE DVLYRKLGIT PSMRSQFEKM EKCFQKYITE GHIPMREMYA 240 DMTPGAMWRQ EKYEQLQREN RELKEEIKRK NHLIREMRNT KIWKMYRKYR KMVERK 296
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0R0FJF0-F1-model_v4 | 1 | 240 | 16 | 237 | 0.559 |
0.6786 |
| AF-B5WWL2-F1-model_v4 | 1 | 240 | 18 | 245 | 0.5466 |
0.6577 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9AGZ0-F1-model_v4 | GT2 | 2 | 240 | 1 | 242 | 0.5332 |
0.8885 |
| AF-D9R088-F1-model_v4 | GT2 , GT4 | 1 | 296 | 1 | 647 | 0.5273 |
0.8256 |
| A0A829WPC6 | GT2 , GT4 | 1 | 275 | 262 | 540 | 0.4912 |
0.8661 |
| A0A239QLG0 | GT2 | 1 | 259 | 1 | 264 | 0.486 |
0.8469 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 293 | 300 | 1406 | 0.4707 |
0.8298 |
| QWT52131.1 | GT2 | 1 | 270 | 1 | 451 | 0.4587 |
0.7836 |
| C6LFR9 | GT2 , GT4 | 1 | 257 | 300 | 1289 | 0.4482 |
0.8947 |
| A0A2T4T973 | GT2 , GT4 | 1 | 296 | 261 | 951 | 0.4472 |
0.7308 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 268 | 232 | 473 | 0.4274 |
0.8392 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A829WPC6 | GT2 , GT4 | 1 | 275 | 262 | 540 | 0.4912 |
0.8661 |
| A0A239QLG0 | GT2 | 1 | 259 | 1 | 264 | 0.486 |
0.8469 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 293 | 300 | 1406 | 0.4707 |
0.8298 |
| QWT52131.1 | GT2 | 1 | 270 | 1 | 451 | 0.4587 |
0.7836 |
| C6LFR9 | GT2 , GT4 | 1 | 257 | 300 | 1289 | 0.4482 |
0.8947 |
| A0A2T4T973 | GT2 , GT4 | 1 | 296 | 261 | 951 | 0.4472 |
0.7308 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7szc-assembly1.cif.gz_A | 1 | 222 | 15 | 229 | 0.5607 |
0.6885 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9P7N1-F1-model_v4 | 1 | 237 | 20 | 238 | 0.5554 |
0.6837 |