PROTEIN: CokerMO_2019_SRR8692231_bin.5_k141_36721_60
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
CokerMO_2019_SRR8692231_bin.5_k141_36721_60.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692231_bin.5_k141_36721_60
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MQLFMKKYHF NFGYNLYNYI YKIGVPETKE PKGGKVMKAK KIVSVFCAMA VIMGTMTGFA 60 GVEVQAAKKD KKAEDDLSEH VEITLGGINS GDSSEDWPTE NLKMLEEKFN VTFKAQGYDN 120 ESLNLDLSGG TTCDIIQVTD SHIAGVLKGK HAVNLEDYKD IAPNIFSDRM QFRNDVMKTF 180 KSDKSGGQYF VTPRVNVGDL AINYGTRLNN GYVVRWDLYK EIGCPEINND DDYIEALKAM 240 KEIYPETEDG LPVYAMSPYN DAGLHPYYMK GCVTEGYMYL NNGLYAQNVE TNDLVADVYD 300 AYNPDVVTPF WSSMKFYNKL YKEGLLDPDA FIATQSDLSE KYEKGQYLGG TSDWLFSSHN 360 TNARAQDSET LKQYIVLPAK MGWANENHQA GWAGKYFFVS SHSKNIERAV MILDYLQSPE 420 FSRAVDSGVE GRWEAGEDGK PALTDDTINM KEDGNRTDEW KATGIGEGNL NCFVGESSYN 480 RLDDGGLVNL WLEDDMLSRG LTAAEKDMCE TLDLTVPSDV LKNHVEAGTS TDFRNCNMAI 540 QMALEVTPKD IVRIDTNCAE IAVNAVPSLI QAETEEDFQA AKDALMEQLK GAGIEDSIKW 600 WMAAWDNAKT GIEELQK 617
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DRJ6-F1-model_v4 | 41 | 614 | 31 | 514 | 0.5434 |
0.6407 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 65 | 614 | 33 | 506 | 0.6325 |
0.7524 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 65 | 614 | 33 | 506 | 0.6325 |
0.7524 |
| A0A9Q8PNJ5 | GH4 | 18 | 601 | 96 | 866 | 0.4385 |
0.5438 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fth-assembly1.cif.gz_A | 77 | 614 | 1 | 496 | 0.6869 |
0.7765 |
| 3omb-assembly1.cif.gz_A | 76 | 614 | 4 | 503 | 0.686 |
0.7744 |
| 5g5y-assembly1.cif.gz_A | 77 | 617 | 1 | 494 | 0.6853 |
0.7765 |
| 5xs8-assembly1.cif.gz_A | 80 | 609 | 1 | 474 | 0.6807 |
0.7839 |
| 5g62-assembly2.cif.gz_B | 81 | 617 | 1 | 491 | 0.6786 |
0.7706 |
| 5h6u-assembly1.cif.gz_A | 75 | 614 | 2 | 487 | 0.6698 |
0.7651 |
| 3vlw-assembly2.cif.gz_B | 74 | 614 | 3 | 489 | 0.6685 |
0.7636 |
| 4tqu-assembly1.cif.gz_Q | 75 | 617 | 5 | 492 | 0.6674 |
0.7633 |
| 6jhx-assembly2.cif.gz_B | 75 | 611 | 5 | 483 | 0.6625 |
0.7634 |
| 5suo-assembly1.cif.gz_A | 80 | 614 | 1 | 451 | 0.648 |
0.7617 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 64 | 617 | 30 | 538 | 0.6812 |
0.7807 |
| AF-Q795R2-F1-model_v4 | 41 | 611 | 5 | 498 | 0.6236 |
0.7111 |
| AF-O58758-F1-model_v4 | 33 | 604 | 1 | 420 | 0.5425 |
0.6588 |
| AF-D4GP35-F1-model_v4 | 29 | 600 | 15 | 459 | 0.5296 |
0.6374 |