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PROTEIN: CokerMO_2019_SRR8692231_bin.5_k141_36398_104

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Protein File & Metadata
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Source:
CokerMO_2019_SRR8692231_bin.5_k141_36398_104.pdb
Genome ID:
CokerMO_2019_SRR8692231_bin.5
Protein ID:
CokerMO_2019_SRR8692231_bin.5_k141_36398_104

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRLISANAS   EILAMNAAEL   KQSIKASEGR   VVLSENVATR   ETYIGDITNA   EIARAFGADL 60
ILLNCVDVLN   PDIYGLEHDR   DNFVSELHRL   VGRPIGVNLE   PVDLEAEMLE   DRLEIPKGRQ 120
LNLETVKRLE   EVGFDFVCLT   GNPGTGVTNE   QIEKAIRLTK   EHFSGMIIAG   KMHGAGSDEP 180
VADLETAKRF   LEAGADVILV   PAVGTVPGFD   TDELKAVVKE   VHRCGGLVLT   AIGTSQESSD 240
EDTIKDIAIM   NKICGVDIQH   IGDAGYGGVA   PVENLLAMSK   ALRGVRHTVS   MIARSINR 298
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A132P1I0-F1-model_v4 1 298 2 308 0.9536 0.9767
AF-A0A1C1CVS0-F1-model_v4 27 283 1 223 0.6741 0.788
AF-Q9NTM9-F1-model_v4 13 287 12 273 0.6395 0.7126
AF-Q9D8X1-F1-model_v4 14 287 11 272 0.6372 0.7096
AF-A0A1C1D171-F1-model_v4 12 298 4 297 0.6361 0.6815
AF-Q9H2M3-F1-model_v4 9 293 7 316 0.6287 0.7344
AF-Q2FWB9-F1-model_v4 3 278 1 214 0.6244 0.756
AF-P60631-F1-model_v4 1 271 1 217 0.6142 0.7454
AF-C0NML1-F1-model_v4 10 272 1 243 0.6104 0.7192
AF-C1GYN2-F1-model_v4 9 271 1 244 0.6099 0.718
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
WDT94128.1 GH39 5 298 11 378 0.5907 0.6889
AF-W0LIW8-F1-model_v4 GH18 26 283 1 305 0.5897 0.705
AF-A9H4Q7-F1-model_v4 GH113 18 283 10 312 0.5884 0.6906
AF-A0A6V7EIE9-F1-model_v4 GH113 24 288 22 322 0.5813 0.6915
AF-A0A808FC22-F1-model_v4 GH113 25 288 23 322 0.5796 0.6923
AF-A0A6V7CNT2-F1-model_v4 GH113 25 288 22 322 0.5791 0.6922
AF-A0A5P3KQI7-F1-model_v4 GH113 25 288 22 322 0.5791 0.6923
AF-A0A348HHC8-F1-model_v4 GH113 25 286 24 327 0.5791 0.7013
AF-A0A6V7EIN6-F1-model_v4 GH113 24 288 22 322 0.5788 0.6903
AF-A0A7G7SNH8-F1-model_v4 GH113 25 290 25 329 0.5788 0.6936
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
WDT94128.1 GH39 5 298 11 378 0.5907 0.6889
A0A1C3SZV1 GH39 26 284 27 341 0.59 0.7351
B2PYU4 GH18 25 283 11 316 0.582 0.7047
F3L160 GH84 26 293 3 284 0.572 0.7009
Q1YER2 GH113 27 286 63 372 0.5461 0.7013
A0A9E9H6M3 GH5 16 297 81 427 0.5449 0.6879
A0A2Z6GA32 GH113 22 286 45 357 0.5438 0.6835
A0A5C2ENI7 GH113 25 291 71 370 0.5423 0.6796
A0A7G9P0T5 GH10 3 298 45 420 0.5335 0.6513
G9BYC2 GH10 4 285 42 360 0.5331 0.6414
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1xi3-assembly1.cif.gz_B 20 287 1 202 0.6685 0.8139
1xm3-assembly1.cif.gz_C 2 287 1 231 0.655 0.7837
1lt7-assembly1.cif.gz_A 12 292 1 277 0.6549 0.7301
4n6e-assembly1.cif.gz_A 2 284 1 229 0.6526 0.7812
1lt7-assembly1.cif.gz_B 12 292 1 277 0.6483 0.7328
6ofu-assembly1.cif.gz_A 9 294 1 259 0.6442 0.7124
4to8-assembly1.cif.gz_B 10 298 1 278 0.6385 0.6837
6ofu-assembly1.cif.gz_D 9 294 1 256 0.6383 0.7102
4to8-assembly1.cif.gz_A 9 298 1 279 0.6379 0.682
8d45-assembly1.cif.gz_D 11 293 1 295 0.6374 0.731
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B2RH32-F1-model_v4 2 287 2 233 0.6513 0.7914
AF-B4SCL0-F1-model_v4 2 287 2 232 0.6466 0.7888
AF-B4TIX9-F1-model_v4 10 291 1 284 0.6464 0.6882
AF-A0LJA4-F1-model_v4 2 287 2 232 0.6455 0.7828
AF-Q8KEJ1-F1-model_v4 2 287 2 232 0.6454 0.7876
AF-B3QMD7-F1-model_v4 2 287 2 232 0.6454 0.7876
AF-Q4FMP0-F1-model_v4 1 287 2 234 0.6442 0.7771
AF-A0RA08-F1-model_v4 2 287 2 232 0.6434 0.7831
AF-Q8P632-F1-model_v4 1 287 4 240 0.6432 0.7732
AF-Q4UXY4-F1-model_v4 1 284 4 237 0.6428 0.7815
Download Full SwissProt Results