PROTEIN: CokerMO_2019_SRR8692231_bin.5_k141_30425_124
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692231_bin.5_k141_30425_124.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692231_bin.5_k141_30425_124
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Protein Sequence
MNYQIIVKQY KGSISVKEER WNLEDAGEQI KNLEQFPMNL RFTERGDGLI VEAEMLQKFT 60 EPVSVSLEYE KENWKKTEYV FFPAAVYNGN RMESKKIPYP PYHAGKTDGN WDMVITDIPR 120 LDREKDSQIS FRSGDMSTPA MGYYDEEKKE GEFLLTSHEI NGQYTGFSVK EKEGSAFFSV 180 SVPAVREGKK YFFGELPDGS GFFPTCEVDS DDEGMVMRQG ERVCLVVRKH IIQAESVSSY 240 IKACNALREE LETGREFTGI PFSEAYDAVK EKYIRYNFTE EGYYRVGTEN EAPPSFWQAG 300 WVGGGMNTCS FIREDKGTAR EQALSTLRFI AEHLQMENGW YVPMYAKGKK YGDNFQDNGS 360 EIVLVRKNGD LLYFLMKQIM ELKTQESVSD NLTELLEGSA EKQADAFVRF FRKNGEMGQF 420 ADTEKEELLQ GGTACGAIIP AALSLAYEYF RKEEYLETAE ALGDIYYEEC LKKGILNGGP 480 GEICQAPDSE SAFAFLESCV QLYETTGKEK WLTEADEAFE MAITWVMSYD FHMPKESTAA 540 KLHVHTTGTV FANAQNKHSA PGICTLSGNS MLKLYRFTGN EKYLFWMKRI SHALSQFVSL 600 KDRPVYTLAE KNLPSGYFNE RVQTSDWEGK ETIGEFLYGS NWPEVTMLLT YTEIPGIYVD 660 VQAKKVWCSD HVKVESEEVK EDAVILKIKN DSSYPARVNV LIDRDRKKKL GHLYFGDMEQ 720 VTLEAGEEKS FSFLL 735
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJK45749.1 | GH0 | 1 | 735 | 33 | 770 | 0.8989 |
0.9295 |
| A0A268K8D9 | GH182 | 1 | 672 | 12 | 673 | 0.8189 |
0.8754 |
| WHP16390.1 | GH182 | 1 | 671 | 4 | 673 | 0.8157 |
0.8623 |
| AF-A0A109W1T4-F1-model_v4 | GH182 | 1 | 716 | 18 | 657 | 0.8082 |
0.8833 |
| A0A9E8YN59 | GH182 | 1 | 716 | 19 | 666 | 0.806 |
0.878 |
| AF-A0A4Y1VDV5-F1-model_v4 | GH182 | 1 | 717 | 15 | 666 | 0.8046 |
0.8697 |
| AF-A0A6M4MIA1-F1-model_v4 | GH182 | 1 | 714 | 19 | 666 | 0.8023 |
0.8726 |
| AF-A0A448L4J4-F1-model_v4 | GH182 | 1 | 714 | 23 | 664 | 0.802 |
0.8787 |
| A0A255SPN4 | GH182 | 1 | 716 | 22 | 665 | 0.8016 |
0.8765 |
| AF-F0SA38-F1-model_v4 | GH182 | 1 | 717 | 23 | 670 | 0.7998 |
0.873 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A268K8D9 | GH182 | 1 | 672 | 12 | 673 | 0.8189 |
0.8754 |
| WHP16390.1 | GH182 | 1 | 671 | 4 | 673 | 0.8157 |
0.8623 |
| A0A9E8YN59 | GH182 | 1 | 716 | 19 | 666 | 0.806 |
0.878 |
| A0A255SPN4 | GH182 | 1 | 716 | 22 | 665 | 0.8016 |
0.8765 |
| UJH67547.1 | GH182 | 1 | 715 | 26 | 670 | 0.787 |
0.8642 |
| A0A139L1L8 | GH182 | 1 | 717 | 50 | 703 | 0.783 |
0.8667 |
| A0A6I6K1P7 | GH182 | 1 | 674 | 41 | 678 | 0.7697 |
0.8578 |
| A0A2S0VPZ6 | GH182 | 1 | 735 | 42 | 721 | 0.7632 |
0.8244 |
| A0A1U9NH28 | GH182 | 1 | 672 | 35 | 681 | 0.7632 |
0.8409 |
| WJH33832.1 | GH182 | 161 | 732 | 1 | 541 | 0.65 |
0.7563 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 1 | 715 | 3 | 669 | 0.5754 |
0.6163 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.