dbCAN Logo

PROTEIN: CokerMO_2019_SRR8692231_bin.5_k141_11663_11

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
CokerMO_2019_SRR8692231_bin.5_k141_11663_11.pdb
Genome ID:
CokerMO_2019_SRR8692231_bin.5
Protein ID:
CokerMO_2019_SRR8692231_bin.5_k141_11663_11

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKIDFMGTVK   DSMLDGFYPE   GWDMKKINEC   CSHAPEEITE   RQAFWNKDFE   PVSCETIEEF 60
NVKFGHEIAL   EIKNTKEAGK   KLALILPVGP   MGMYRWIVYF   LRKWKISCEH   VTCFNMDEWA 120
DKEGNTLNPE   NPASFQYSME   QAFYNPLGEL   TVPVEQRNFA   TKENLPLYPK   KIENLKKGGA 180
RLVTVYGIGR   MCHIAFWEPM   TGAEFETNEE   WKRQEYRIGM   KLHPMTIEQN   AITSFKSRIP 240
LVPCTANTIG   PGLFLQSDRM   IGGADGVFSR   GMQWQGMSLW   MTLRYGPDRY   VTSSYVPELP 300
GTLFFMKELA   GPLDAECN 318
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P42912-F1-model_v4 33 309 8 251 0.7597 0.8861
AF-Q2G0K8-F1-model_v4 49 313 1 242 0.7587 0.8932
AF-A0A132YZ81-F1-model_v4 49 313 1 233 0.7584 0.8885
AF-Q04802-F1-model_v4 49 313 1 245 0.7553 0.8726
AF-Q9XVJ2-F1-model_v4 49 313 1 246 0.7523 0.8978
AF-Q8DPA1-F1-model_v4 49 313 1 233 0.7502 0.8835
AF-Q54XK9-F1-model_v4 49 313 1 250 0.7496 0.8808
AF-Q8ZQX7-F1-model_v4 49 313 1 247 0.7495 0.8896
AF-A0A0H3GK04-F1-model_v4 49 313 1 247 0.7493 0.8893
AF-Q32IQ2-F1-model_v4 49 313 1 247 0.7492 0.8892
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 49 300 1 280 0.5651 0.7099
AF-G0IWQ0-F1-model_v4 CE9 49 314 1 245 0.5206 0.8904
AF-A0A0H4PAS9-F1-model_v4 CE9 49 315 1 246 0.5201 0.8867
AF-A0A1W2H3T6-F1-model_v4 CE9 49 313 1 243 0.5169 0.8907
AF-J9UUU6-F1-model_v4 CE9 49 314 1 240 0.5001 0.8845
AF-K0JLB5-F1-model_v4 CE9 49 313 1 239 0.497 0.883
AF-A0A3B6VIU1-F1-model_v4 CE9 49 313 1 239 0.496 0.881
AF-D8I9Y7-F1-model_v4 CE9 49 313 1 239 0.4956 0.8801
AF-D5U6N5-F1-model_v4 CE9 49 313 1 239 0.4956 0.8801
AF-G0ELA3-F1-model_v4 CE9 49 313 1 239 0.4955 0.8799
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 49 300 1 280 0.5651 0.7099
A0A0H4PAS9 CE9 49 315 1 246 0.5201 0.8867
A0A3B6VIU1 CE9 49 313 1 239 0.496 0.881
U5ECU6 CE9 45 313 388 631 0.4884 0.8442
A0A871RFD9 GH3 23 313 968 1250 0.4445 0.7953
A0A875S4F4 GH3 36 314 832 1287 0.4383 0.8011
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2bkv-assembly1.cif.gz_A 49 313 1 241 0.7747 0.8947
5hj5-assembly2.cif.gz_B 49 314 1 248 0.7512 0.8895
4tm7-assembly1.cif.gz_A 46 313 1 243 0.741 0.8538
7lqm-assembly2.cif.gz_D 49 314 1 248 0.74 0.8765
7lqn-assembly2.cif.gz_I 46 313 1 248 0.7395 0.8681
3oc6-assembly1.cif.gz_A 46 313 1 243 0.7377 0.8511
7lqm-assembly1.cif.gz_A 49 313 1 243 0.7373 0.876
1cd5-assembly1.cif.gz_A 49 313 1 247 0.7349 0.8735
1ne7-assembly1.cif.gz_E 49 313 1 247 0.7337 0.8842
7lqm-assembly1.cif.gz_B 49 313 1 245 0.7311 0.8738
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q97MK9-F1-model_v4 49 313 1 241 0.7815 0.9013
AF-C3L2N7-F1-model_v4 49 313 1 241 0.7793 0.9043
AF-C1FV12-F1-model_v4 49 313 1 241 0.7791 0.904
AF-Q4L9T8-F1-model_v4 49 313 1 242 0.779 0.8976
AF-B1IKY4-F1-model_v4 49 313 1 241 0.7784 0.9033
AF-A8MIX7-F1-model_v4 49 313 1 241 0.7783 0.898
AF-A7FX73-F1-model_v4 49 313 1 241 0.7781 0.903
AF-A5I5R9-F1-model_v4 49 313 1 241 0.778 0.9029
AF-B1KZ07-F1-model_v4 49 313 1 241 0.7778 0.9027
AF-A7GH51-F1-model_v4 49 313 1 241 0.7776 0.9025
Download Full SwissProt Results