PROTEIN: CokerMO_2019_SRR8692226_bin.19_k141_21801_25
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692226_bin.19_k141_21801_25.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692226_bin.19_k141_21801_25
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Protein Sequence
MNKTKKFALN ATFSAIQQVV VMIVGLISPR IMLQFYGSEI NGLVASITQF IAYISLIEAG 60 LSGAAVYSLY KPLAEHDVKG INGIVSAAKR TYTRLGYAFT GLTLVLAAIY ASIVTVQGLS 120 MQEIFFLILV MGVSGAMEFF TMAKYRVLFT ADQKQYILSI CTMVGVVLNM VLIVLCAVLH 180 LSIVWLKVIA TLSVFVRSAI LAGYMRKRYK YVNFKEKPNM RALDKRWDAL YMQILWNLQS 240 GAPVVLATVF TNMVQVSIYS VYNMVIYGIN NVASIFMSGS GMHAAFGEII VKGDQQQLKK 300 VYGQFLFAFY SILTVLYAVT GVMYMPFIQN YVANLSDSQL YILPALAFLF FINGLLCAIQ 360 TPQGMMTIAA GLYRETRIQN SIQAGILVIG GVVLTPLLGL NGILFAAIAS NLYRLFDYVI 420 FISRRFKEIR IRETVIHMVR MVVQVGVVYA IFWFVPLPNN GYLEWALSAL IVLVVAASIV 480 LLSAAIFNRK DLKDLFTRLK LLVKRG 506
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 1 | 504 | 1 | 476 | 0.8728 |
0.9133 |
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8604 |
0.8801 |
| AF-H9L497-F1-model_v4 | 1 | 503 | 1 | 483 | 0.8575 |
0.9 |
| AF-P77377-F1-model_v4 | 1 | 503 | 1 | 483 | 0.8535 |
0.8964 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 504 | 1 | 478 | 0.8513 |
0.8905 |
| AF-Q8DPI1-F1-model_v4 | 1 | 506 | 2 | 495 | 0.8394 |
0.8676 |
| AF-Q32ET1-F1-model_v4 | 2 | 501 | 1 | 511 | 0.8362 |
0.8682 |
| AF-P37169-F1-model_v4 | 1 | 499 | 8 | 524 | 0.8314 |
0.8748 |
| AF-P0AF16-F1-model_v4 | 1 | 501 | 1 | 511 | 0.8312 |
0.8624 |
| AF-A0A0H3GRG5-F1-model_v4 | 1 | 501 | 1 | 511 | 0.8263 |
0.858 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 506 | 1 | 512 | 0.8501 |
0.8763 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 503 | 35 | 545 | 0.8104 |
0.8617 |
| QNU38870.1 | GT4 | 2 | 505 | 1 | 478 | 0.7468 |
0.8701 |
| QJC17489.1 | GT2 | 1 | 506 | 338 | 843 | 0.7141 |
0.8996 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 506 | 1 | 590 | 0.6823 |
0.8799 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 506 | 10 | 655 | 0.6748 |
0.8892 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 506 | 4 | 493 | 0.6726 |
0.884 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 7 | 506 | 1 | 530 | 0.6704 |
0.8507 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 505 | 2 | 566 | 0.6656 |
0.8416 |
| A0A4V3CWU6 | GT4 | 4 | 498 | 1 | 556 | 0.6579 |
0.8441 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 506 | 1 | 512 | 0.8501 |
0.8763 |
| A0A160T2N7 | GT28 | 1 | 503 | 35 | 545 | 0.8104 |
0.8617 |
| QNU38870.1 | GT4 | 2 | 505 | 1 | 478 | 0.7468 |
0.8701 |
| QJC17489.1 | GT2 | 1 | 506 | 338 | 843 | 0.7141 |
0.8996 |
| A0A3Q9G719 | GT4 | 1 | 506 | 1 | 590 | 0.6823 |
0.8799 |
| D1BIF1 | GT4 | 1 | 506 | 10 | 655 | 0.6748 |
0.8892 |
| A0A517Z2I8 | GT2 | 1 | 506 | 4 | 493 | 0.6726 |
0.884 |
| A0A2U8PPB3 | GT4 | 7 | 506 | 1 | 530 | 0.6704 |
0.8507 |
| A0A3T0RPT8 | GT4 | 1 | 505 | 2 | 566 | 0.6656 |
0.8416 |
| A0A4V3CWU6 | GT4 | 4 | 498 | 1 | 556 | 0.6579 |
0.8441 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 12 | 495 | 1 | 496 | 0.8196 |
0.8656 |
| 6nc6-assembly2.cif.gz_B | 8 | 493 | 1 | 461 | 0.8062 |
0.861 |
| 7wag-assembly1.cif.gz_A | 4 | 502 | 1 | 514 | 0.8024 |
0.8447 |
| 6cc4-assembly1.cif.gz_A | 1 | 502 | 55 | 608 | 0.7651 |
0.8546 |
| 6fhz-assembly1.cif.gz_A | 7 | 430 | 8 | 436 | 0.7597 |
0.8558 |
| 4mlb-assembly1.cif.gz_C | 1 | 428 | 4 | 448 | 0.692 |
0.7883 |
| 3wbn-assembly1.cif.gz_A | 1 | 428 | 2 | 446 | 0.6906 |
0.7853 |
| 6hfb-assembly3.cif.gz_C | 1 | 428 | 4 | 447 | 0.6903 |
0.7858 |
| 5y50-assembly1.cif.gz_A | 4 | 427 | 7 | 436 | 0.6841 |
0.7832 |
| 6gwh-assembly1.cif.gz_A | 1 | 428 | 3 | 435 | 0.6834 |
0.77 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 5 | 505 | 1 | 502 | 0.8899 |
0.911 |
| AF-Q48457-F1-model_v4 | 1 | 506 | 1 | 485 | 0.861 |
0.8957 |
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8604 |
0.8801 |
| AF-P33699-F1-model_v4 | 1 | 506 | 3 | 487 | 0.8563 |
0.8968 |
| AF-P77377-F1-model_v4 | 1 | 503 | 1 | 483 | 0.8535 |
0.8964 |
| AF-D4GU68-F1-model_v4 | 1 | 505 | 1 | 472 | 0.8353 |
0.8821 |
| AF-O34238-F1-model_v4 | 1 | 501 | 2 | 525 | 0.8341 |
0.8749 |
| AF-O34674-F1-model_v4 | 3 | 504 | 1 | 538 | 0.8337 |
0.8846 |
| AF-P37169-F1-model_v4 | 1 | 499 | 8 | 524 | 0.8314 |
0.8748 |
| AF-P0AF16-F1-model_v4 | 1 | 501 | 1 | 511 | 0.8312 |
0.8624 |