PROTEIN: CokerMO_2019_SRR8692215_bin.33_k141_45780_104
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692215_bin.33_k141_45780_104.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692215_bin.33_k141_45780_104
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Protein Sequence
MSILKTGNLF SYFAGLLCAC SMFLCSSCSD SPDSSDNSGN TGSKEYGIWV QIKTDKTYNY 60 LLTVSDLMKD TIISPLKSGI DTEGNIDGTY GTAKGGYYYY PSNTKISKLQ ITNGKFVEVD 120 NCIVDDGDYS SLMMKAYWND YLNVLGWAGK VADNNTIEKK IYQIKVSDMT VLSKNTLKFP 180 VPESLIKNPD KPGEYLAAKD LSISPTSFTI IDNKAFVGFV YWDWDHWIHT DDAYMLVCDY 240 PSLENVKVLK ESKYGYMSGT WWQSSSSFVD SKGDLYFTTV NADNKYTLLR IKKGETQFDE 300 KYVYDLKDYN IYIEGYGGQY DHHTYIKDGL TLLNSYVVDV WNKKVIVDLN TLGFGKVQEA 360 YSGGILVEDG KLYVVMKTAN SRWYVCQYNP DTNKMTRGLE IDGGVSSVGR IDKFK 415
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q54S67-F1-model_v4 | 6 | 415 | 5 | 376 | 0.576 |
0.633 |
| AF-Q54HW8-F1-model_v4 | 28 | 415 | 32 | 352 | 0.5565 |
0.673 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2K9F0V2 | PL42 | 43 | 392 | 84 | 488 | 0.5638 |
0.7257 |
| A0A0C5VPL4 | PL42 | 9 | 397 | 45 | 451 | 0.5318 |
0.6645 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3fgb-assembly2.cif.gz_B | 44 | 414 | 2 | 349 | 0.6304 |
0.7077 |
| 3scy-assembly1.cif.gz_A | 44 | 415 | 8 | 356 | 0.6289 |
0.71 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FWX8-F1-model_v4 | 44 | 413 | 1 | 342 | 0.6491 |
0.7318 |
| AF-Q6G811-F1-model_v4 | 44 | 413 | 1 | 342 | 0.6433 |
0.7273 |
| AF-Q5HEJ8-F1-model_v4 | 44 | 413 | 1 | 342 | 0.6431 |
0.7271 |
| AF-Q2YU76-F1-model_v4 | 44 | 413 | 1 | 342 | 0.6426 |
0.7264 |
| AF-Q8NVS2-F1-model_v4 | 44 | 413 | 1 | 342 | 0.6425 |
0.7265 |
| AF-Q2FFH4-F1-model_v4 | 44 | 413 | 1 | 342 | 0.6422 |
0.7253 |
| AF-Q7A4P4-F1-model_v4 | 44 | 413 | 1 | 342 | 0.6405 |
0.7249 |
| AF-Q54HW8-F1-model_v4 | 28 | 415 | 32 | 352 | 0.5565 |
0.673 |