PROTEIN: CokerMO_2019_SRR8692215_bin.33_k141_41114_175
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
CokerMO_2019_SRR8692215_bin.33_k141_41114_175.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692215_bin.33_k141_41114_175
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNKLVWKLLR EHISFAQLCG FFLANLFGTI IVLLSIQFYK DIVPVFTQGD SFLKKDYIIA 60 TKKISTIGSF SGQSNTFSKE DIEDLKKQSF TQSIGVFTPA LFKVSAGFGV QEAGIHLSTE 120 MFFESVPDAY VDINLEKWHF DKNTHTIPII IPRNYLNLYN FGFAQSRSLP KLSEGLMGLI 180 QMDITIQGDK GVERYKGSIV GFSNRLNTIL VPQSFMDWAN VTFAHGKESQ PSRIILEVKN 240 PTDTAITSYF QTKGYETEGN NLDAGKTTYF LRLMTSIVAG IGLIICALSF YILMLSIYLL 300 LQKNTVKLEN LLLIGYSPSR VALPYQILAI GTNFIVLILS LGGVFWIRNY YTDIVLSLFP 360 QLNTGTILPS VFSGLILFSC ISLIDFLLIR NKVISIWKKL SH 402
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I760-F1-model_v4 | 1 | 401 | 5 | 392 | 0.6784 |
0.7255 |
| AF-A0A132P1Z1-F1-model_v4 | 1 | 402 | 3 | 419 | 0.6016 |
0.6463 |
| AF-P9WG19-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5812 |
0.6839 |
| AF-O32882-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5792 |
0.6825 |
| AF-P44872-F1-model_v4 | 1 | 402 | 15 | 310 | 0.5711 |
0.6895 |
| AF-K0F5F4-F1-model_v4 | 1 | 399 | 1 | 301 | 0.5669 |
0.6639 |
| AF-A0A0H3GUD7-F1-model_v4 | 1 | 402 | 57 | 351 | 0.5485 |
0.7026 |
| AF-A0A132P270-F1-model_v4 | 1 | 396 | 10 | 297 | 0.5473 |
0.6622 |
| AF-Q8ZLF0-F1-model_v4 | 1 | 402 | 57 | 351 | 0.5356 |
0.6854 |
| AF-Q32AS1-F1-model_v4 | 1 | 402 | 58 | 352 | 0.5351 |
0.6855 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A837AKF4 | CBM50 | 1 | 400 | 1 | 485 | 0.5227 |
0.5981 |
| A0A162G5M5 | GT2 | 1 | 400 | 265 | 593 | 0.4888 |
0.7052 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A837AKF4 | CBM50 | 1 | 400 | 1 | 485 | 0.5227 |
0.5981 |
| A0A162G5M5 | GT2 | 1 | 400 | 265 | 593 | 0.4888 |
0.7052 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7ark-assembly1.cif.gz_C | 1 | 399 | 1 | 382 | 0.5804 |
0.6255 |
| 7v8i-assembly1.cif.gz_E | 1 | 397 | 1 | 401 | 0.5692 |
0.6093 |
| 8jia-assembly1.cif.gz_D | 1 | 397 | 5 | 295 | 0.562 |
0.6738 |
| 8tzk-assembly1.cif.gz_C | 1 | 402 | 9 | 304 | 0.5111 |
0.6133 |
| 5lil-assembly1.cif.gz_A | 1 | 400 | 246 | 609 | 0.4995 |
0.6676 |
| 5nik-assembly1.cif.gz_J | 1 | 401 | 105 | 622 | 0.4758 |
0.592 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A5U7B6-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5824 |
0.6852 |
| AF-P9WG18-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5817 |
0.6843 |
| AF-P9WG19-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5812 |
0.6839 |
| AF-O35005-F1-model_v4 | 1 | 400 | 1 | 427 | 0.5798 |
0.6339 |
| AF-O32882-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5792 |
0.6825 |
| AF-Q7TX91-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5787 |
0.6807 |
| AF-Q81X30-F1-model_v4 | 1 | 399 | 8 | 297 | 0.5783 |
0.6975 |
| AF-A5FMG4-F1-model_v4 | 10 | 400 | 9 | 289 | 0.5777 |
0.7071 |
| AF-O34876-F1-model_v4 | 1 | 399 | 4 | 296 | 0.5713 |
0.6806 |
| AF-P44872-F1-model_v4 | 1 | 402 | 15 | 310 | 0.5711 |
0.6895 |