PROTEIN: CokerMO_2019_SRR8692214_bin.21_k141_41877_271
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692214_bin.21_k141_41877_271.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692214_bin.21_k141_41877_271
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Protein Sequence
MKNVIYSKFS NERARQFSIR TDICQDGEER WVEKVAATQE AQSHVEQLVR WQELLGQQFA 60 GSGVLFDPCE KVEGGVRLAY ISGGNLEEYL DDLLDRGEEE RAFQSLMTYA RFLQRIHSDQ 120 AFTVTPEFVK VFGEVSLPQG LLSGRISDID LVCANLMTAE PATVIDYEWT FDFPIPGNYV 180 VYRMLHYYLD THSKRQRLHG REPYGQLGIT EAELEAYRQM EIHFQRYITD GHVPMREMYR 240 DISPGVKGVT VLQGEQLQIY ESYGDGFQEK NSRCYPIREE KVHVRAPVSE GVNYLRVDPG 300 SCACAVKIHK LNFQPGDVPA QYHCEDGWAS GQWLYIARED PNLTNIPVPE GAKELEIYLE 360 IHPVDLEFLG ELAGRLRRDA QENRELRVKL AQQESQIHQM ENTKVWKFYQ GYRNKKERKR 420
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9AGZ0-F1-model_v4 | GT2 | 2 | 418 | 1 | 314 | 0.4424 |
0.694 |
| QWT52131.1 | GT2 | 1 | 413 | 1 | 507 | 0.4034 |
0.5875 |
| AF-D9R088-F1-model_v4 | GT2 , GT4 | 1 | 420 | 1 | 864 | 0.4025 |
0.5748 |
| A0A829WPC6 | GT2 , GT4 | 1 | 420 | 263 | 1006 | 0.3944 |
0.5999 |
| A0A239QLG0 | GT2 | 1 | 395 | 1 | 652 | 0.3923 |
0.5784 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 420 | 300 | 1877 | 0.3916 |
0.6434 |
| A0A2T4T973 | GT2 , GT4 | 1 | 404 | 261 | 1149 | 0.3612 |
0.5629 |
| C6LFR9 | GT2 , GT4 | 1 | 376 | 300 | 1355 | 0.3425 |
0.625 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 420 | 232 | 1048 | 0.3372 |
0.5051 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QWT52131.1 | GT2 | 1 | 413 | 1 | 507 | 0.4034 |
0.5875 |
| A0A829WPC6 | GT2 , GT4 | 1 | 420 | 263 | 1006 | 0.3944 |
0.5999 |
| A0A239QLG0 | GT2 | 1 | 395 | 1 | 652 | 0.3923 |
0.5784 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 420 | 300 | 1877 | 0.3916 |
0.6434 |
| A0A2T4T973 | GT2 , GT4 | 1 | 404 | 261 | 1149 | 0.3612 |
0.5629 |
| C6LFR9 | GT2 , GT4 | 1 | 376 | 300 | 1355 | 0.3425 |
0.625 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.