PROTEIN: CokerMO_2019_SRR8692194_bin.8_k141_11778_66
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692194_bin.8_k141_11778_66.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692194_bin.8_k141_11778_66
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Protein Sequence
MPYPFNYFAS IFNFRSSFAN RKKLSWFQMI FTSFFLISIT LLPVALQNAQ LKTYPLTTFV 60 SDVFDPLSTD VMKDIQEHVV IKDQELTYTG TNPVHKTSKG QVILGQEAKA SEGKELTLHF 120 DRKQLIISKE NKELATVSYQ AINQESLRDK KSFTQAISSD WFRDNRLPVS LFLVIFSGFL 180 STVNYLILIV GASFFLYLTR KSRLFSLQTF KECFNCILNC LGLPILLSVF ISLLFHQVFT 240 TTIMIQNVLF VLYLAMVFYK THFRDPDYHR 270
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P59204-F1-model_v4 | 1 | 269 | 2 | 265 | 0.9243 |
0.9529 |
| AF-A0A132ZFQ3-F1-model_v4 | 1 | 268 | 2 | 270 | 0.8562 |
0.8849 |
| AF-A0A132Z3C4-F1-model_v4 | 1 | 270 | 1 | 266 | 0.5585 |
0.5913 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387DIN9 | GH65 | 1 | 270 | 9 | 275 | 0.8441 |
0.8836 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387DIN9 | GH65 | 1 | 270 | 9 | 275 | 0.8441 |
0.8836 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P59203-F1-model_v4 | 1 | 269 | 2 | 265 | 0.9264 |
0.9545 |
| AF-P59204-F1-model_v4 | 1 | 269 | 2 | 265 | 0.9243 |
0.9529 |
| AF-Q99ZB6-F1-model_v4 | 1 | 265 | 5 | 271 | 0.8585 |
0.8965 |
| AF-O06992-F1-model_v4 | 1 | 270 | 7 | 283 | 0.7357 |
0.7911 |
| AF-P54485-F1-model_v4 | 1 | 270 | 1 | 251 | 0.5749 |
0.6258 |