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PROTEIN: ChuDM_2017_SRR8942399_bin.18_k119_5857_87

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Protein File & Metadata
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Source:
ChuDM_2017_SRR8942399_bin.18_k119_5857_87.pdb
Genome ID:
ChuDM_2017_SRR8942399_bin.18
Protein ID:
ChuDM_2017_SRR8942399_bin.18_k119_5857_87

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRAFDVEMSR   RGFASALAAG   ALSLALAGCG   GGAAGAGSAA   GSAATDGAGA   AAEPVEVRVT 60
SLKGPTSIGL   VQFMDRAADG   ETDNEFDFAI   NTAADEIVPK   VIQGDIDIAL   VPANVASVLY 120
NKTEGAVQVI   DINTLGVLNV   VTGDANVASF   GDLAGRTVYM   TGKGTTPEYV   MNFLLERAGL 180
TGQVTLEFKS   EPTEVLSALL   ADPSAVGVLP   EPFKTAAIAK   SEGKLSAPVS   LTDVWDELAG 240
DTGSRLLTGV   TVVRRAFAEE   HPEAVAEFLS   CHAASVKAVN   AAPADWAQAV   VDAGIVDNAK 300
IAEKAIPGCM   LVCQTGKDMK   AALSGYLQVL   ADADASAVGG   KLPADDFYYM   E 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F6W2-F1-model_v4 53 350 28 325 0.7486 0.8624
AF-A0A0H3GZA9-F1-model_v4 52 351 25 310 0.7105 0.8452
AF-Q9I0P2-F1-model_v4 50 351 19 306 0.7101 0.8376
AF-A0A0H3GP99-F1-model_v4 47 351 19 318 0.7083 0.815
AF-A0A0D2GYL1-F1-model_v4 54 351 1 295 0.7041 0.8051
AF-A0A0H3GR32-F1-model_v4 51 351 46 344 0.689 0.815
AF-U7PRE8-F1-model_v4 51 351 14 321 0.6889 0.7933
AF-U7Q5Y8-F1-model_v4 50 351 3 313 0.6859 0.7898
AF-U7PXF6-F1-model_v4 54 351 1 294 0.6835 0.8073
AF-Q9I0N8-F1-model_v4 53 351 25 310 0.6809 0.8046
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-L0RFS4-F1-model_v4 GH23 36 304 7 451 0.4331 0.636
AF-A0A1Y4PH24-F1-model_v4 GH23 52 301 37 443 0.4295 0.6647
AF-A0A0P0ETY4-F1-model_v4 GH23 52 301 44 450 0.4295 0.6693
AF-A0A1C7H7G1-F1-model_v4 GH23 52 302 35 327 0.4294 0.6644
AF-A0A4P6RLL9-F1-model_v4 GH23 51 302 19 312 0.4289 0.6535
AF-F7LTV0-F1-model_v4 GH23 52 301 37 443 0.4285 0.6635
A0A975KCS4 GH23 49 302 43 339 0.4276 0.6606
AF-D6D3U4-F1-model_v4 GH23 52 302 38 330 0.427 0.6623
AF-E1WT20-F1-model_v4 GH23 52 301 37 443 0.4269 0.6624
AF-E6SPV9-F1-model_v4 GH23 27 301 23 443 0.4267 0.6093
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A975KCS4 GH23 49 302 43 339 0.4276 0.6606
C6BRT1 GH23 42 304 34 474 0.4229 0.6417
E1YCM4 GH23 28 304 12 447 0.4171 0.5962
A8ZWR8 GH23 26 304 10 447 0.4117 0.5769
A0A6I6K4Y9 GH23 52 299 48 299 0.4098 0.6447
A0A0S2HZI4 GH23 24 299 33 305 0.399 0.5845
A0A3T0VQB1 GH23 52 304 46 466 0.3964 0.6274
Q0VPC5 GH23 4 302 47 513 0.3571 0.5479
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3hn0-assembly1.cif.gz_A 54 351 1 279 0.7884 0.8946
2x26-assembly2.cif.gz_B 53 350 1 286 0.7343 0.8364
2x26-assembly1.cif.gz_A 53 351 1 287 0.7162 0.8351
3un6-assembly1.cif.gz_A 54 351 1 283 0.6829 0.7877
3uif-assembly1.cif.gz_A 53 351 3 307 0.6784 0.7885
3ksx-assembly1.cif.gz_A 52 351 1 289 0.6664 0.7547
7ahr-assembly1.cif.gz_A 54 351 5 280 0.6611 0.7721
7an6-assembly1.cif.gz_B 54 351 5 282 0.6549 0.7595
6st1-assembly2.cif.gz_B 56 351 1 295 0.6546 0.7383
7an9-assembly1.cif.gz_B 55 351 1 277 0.6535 0.7536
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0SP84-F1-model_v4 52 351 28 325 0.6921 0.8089
AF-A9WGD2-F1-model_v4 52 351 42 344 0.6768 0.8045
AF-Q9KXN1-F1-model_v4 53 350 1 282 0.6744 0.7711
AF-P75853-F1-model_v4 45 351 16 311 0.6647 0.7696
AF-Q5SI12-F1-model_v4 55 349 1 272 0.6465 0.7512
AF-Q8FUN4-F1-model_v4 52 351 21 317 0.6439 0.7436
AF-Q5ZV75-F1-model_v4 53 351 5 297 0.6385 0.7451
AF-Q576E1-F1-model_v4 50 351 19 317 0.6377 0.7332
AF-Q47537-F1-model_v4 53 351 20 317 0.6364 0.7351
AF-Q2YJB6-F1-model_v4 50 351 19 317 0.636 0.7312
Download Full SwissProt Results