PROTEIN: ChuDM_2017_SRR8942345_bin.6_k119_24879_43
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Protein File & Metadata
Source:
ChuDM_2017_SRR8942345_bin.6_k119_24879_43.pdb
Genome ID:
Protein ID:
ChuDM_2017_SRR8942345_bin.6_k119_24879_43
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Protein Sequence
MSNKSESRTS KSLTNAKVSL FFMILTFIVN FISRKYSLDY LGPEIVGMRS TIGTILSLLS 60 LSDLGIGSSV GLSLFKPLQE RNYTEVNEII SLQGWLYKRV FAGLTVVMLI VMGLVPVFFS 120 RMEAPMIYVY LTLVVYYIGS MGSFTMNYKS IIISVDQKGY LTSRFTSTST LVKIIVQLLI 180 IRYVSYQPYL FWLLADFLFV VLNIYVINYL TAKYYPWVKP NTGRGKEYFK KYPQVFKLVG 240 QVFIYNLAGI ITSSMNPFVI SQVVGLVSVA LYDNYKNLIT NIRAVVLSLF SNIGGGVASL 300 VAEGNEVKSY AFFWDMISLK YLVAGVAAFG FLNFSSPLVS LWLGGQYILS LTTVIVMVAL 360 AYIDLSRLSI DSYINGYKLF QDSWSPIAQS IIYLTVAIVC GQKYGFIGVL IGDLVGTVAI 420 VVLWKPYNLY HNGFKRSIMD YWKGVLKFPI IGWALILLFT WVVGRLHLNM GSWLMLGVHI 480 IWLTPIFTIL LWLIYYSISS GFRRMTVRLY TVAFNATPNP VKRFLPLPAW FEKRC 535
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 5 | 519 | 1 | 507 | 0.836 |
0.8755 |
| AF-Q2G262-F1-model_v4 | 5 | 518 | 1 | 476 | 0.8346 |
0.8975 |
| AF-Q8DPI1-F1-model_v4 | 5 | 523 | 1 | 495 | 0.8293 |
0.8782 |
| AF-H9L497-F1-model_v4 | 6 | 531 | 1 | 492 | 0.8273 |
0.8787 |
| AF-A0A0H3GSJ3-F1-model_v4 | 6 | 522 | 1 | 478 | 0.8241 |
0.886 |
| AF-P77377-F1-model_v4 | 6 | 531 | 1 | 492 | 0.8222 |
0.8738 |
| AF-Q2G0R7-F1-model_v4 | 4 | 530 | 2 | 508 | 0.795 |
0.8359 |
| AF-Q32ET1-F1-model_v4 | 8 | 515 | 1 | 511 | 0.7916 |
0.8331 |
| AF-P0AF16-F1-model_v4 | 8 | 535 | 1 | 511 | 0.7911 |
0.8283 |
| AF-Q23444-F1-model_v4 | 8 | 519 | 1 | 522 | 0.7891 |
0.83 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 5 | 518 | 1 | 509 | 0.8166 |
0.8591 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 4 | 516 | 34 | 545 | 0.7748 |
0.8333 |
| QJC17489.1 | GT2 | 1 | 522 | 307 | 845 | 0.6822 |
0.8621 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 5 | 535 | 2 | 851 | 0.6693 |
0.8335 |
| AF-D1BIF1-F1-model_v4 | GT4 | 3 | 523 | 6 | 657 | 0.6504 |
0.8615 |
| A0A0C5BEZ8 | GT4 | 7 | 535 | 1 | 897 | 0.648 |
0.8255 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 5 | 533 | 1 | 619 | 0.647 |
0.8268 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 2 | 515 | 16 | 516 | 0.6373 |
0.8384 |
| AF-A0A6P1FQ34-F1-model_v4 | GT4 | 6 | 534 | 1 | 617 | 0.6368 |
0.8079 |
| AF-A1R6N5-F1-model_v4 | GT2 | 3 | 522 | 3 | 645 | 0.6336 |
0.8042 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 5 | 518 | 1 | 509 | 0.8166 |
0.8591 |
| A0A160T2N7 | GT28 | 4 | 516 | 34 | 545 | 0.7748 |
0.8333 |
| QJC17489.1 | GT2 | 1 | 522 | 307 | 845 | 0.6822 |
0.8621 |
| A0A3T0RPT8 | GT4 | 5 | 535 | 2 | 851 | 0.6693 |
0.8335 |
| D1BIF1 | GT4 | 3 | 523 | 6 | 657 | 0.6504 |
0.8615 |
| A0A0C5BEZ8 | GT4 | 7 | 535 | 1 | 897 | 0.648 |
0.8255 |
| A0A3Q9G719 | GT4 | 5 | 533 | 1 | 619 | 0.647 |
0.8268 |
| F9ZKY1 | GT2 | 2 | 515 | 16 | 516 | 0.6373 |
0.8384 |
| A0A517Z2I8 | GT2 | 4 | 524 | 4 | 671 | 0.6256 |
0.8021 |
| A0A5Q0NSF2 | GT2 | 4 | 526 | 1 | 785 | 0.6249 |
0.797 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 15 | 509 | 1 | 496 | 0.7779 |
0.827 |
| 6nc6-assembly2.cif.gz_B | 13 | 528 | 1 | 461 | 0.769 |
0.8426 |
| 7wag-assembly1.cif.gz_A | 9 | 515 | 2 | 513 | 0.7438 |
0.7954 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 9 | 524 | 1 | 504 | 0.8563 |
0.8984 |
| AF-Q58467-F1-model_v4 | 5 | 519 | 1 | 507 | 0.836 |
0.8755 |
| AF-Q48457-F1-model_v4 | 6 | 519 | 1 | 484 | 0.8321 |
0.8903 |
| AF-P77377-F1-model_v4 | 6 | 531 | 1 | 492 | 0.8222 |
0.8738 |
| AF-D4GU68-F1-model_v4 | 6 | 519 | 1 | 472 | 0.8135 |
0.8802 |
| AF-O32273-F1-model_v4 | 3 | 522 | 2 | 483 | 0.8074 |
0.8669 |
| AF-D4GYG8-F1-model_v4 | 8 | 518 | 1 | 476 | 0.8068 |
0.8707 |
| AF-P33699-F1-model_v4 | 7 | 520 | 5 | 487 | 0.8064 |
0.8737 |
| AF-O34238-F1-model_v4 | 4 | 535 | 2 | 525 | 0.8009 |
0.8279 |
| AF-O83529-F1-model_v4 | 5 | 524 | 1 | 526 | 0.8008 |
0.8355 |