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PROTEIN: k141_81228_28

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Protein File & Metadata
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Source:
k141_81228_28.pdb
Genome ID:
CGMR066448
Protein ID:
k141_81228_28

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Detailed structural information will appear here after analysis...

Protein Sequence 
MDFMSTVKDS   LLEGFYPVGW   DMQRIDECCE   KGVARESFWN   KDFNPIECKD   IHEFDVLMGH 60
EIALQIKQTK   EEGRKLAMIL   PVGPMGMYRW   ASYFINEWKI   SCEHVYTFNM   DEWSDGEGNT 120
LPNTNPASFE   YSMKEAFFNK   LGKYTVPEAQ   RNFATKDNLP   TYEGKIKALK   AEGAKLVLVY 180
GIGRMCHIAF   WEPQFATDYK   NDEEWKQATH   RIGAKLHPLT   IEQNAITSFK   SRTTLVPCRA 240
NTIGPGLFLQ   ADYAIGGADG   ALGRGMGWQG   MSFLTTLHYG   PDRHITSTFI   PTLAGRLFYL 300
SELAGPLTAE   CN 312
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q2G0K8-F1-model_v4 43 307 1 242 0.7642 0.8926
AF-A0A132YZ81-F1-model_v4 43 307 1 233 0.7628 0.8871
AF-Q04802-F1-model_v4 43 307 1 245 0.7592 0.8704
AF-P42912-F1-model_v4 30 303 9 251 0.7572 0.8802
AF-Q9XVJ2-F1-model_v4 43 308 1 247 0.7569 0.8928
AF-Q54XK9-F1-model_v4 43 308 1 251 0.7548 0.8767
AF-Q8DPA1-F1-model_v4 43 308 1 234 0.7545 0.8778
AF-Q8ZQX7-F1-model_v4 43 308 1 248 0.7543 0.8849
AF-A0A0H3GK04-F1-model_v4 43 308 1 248 0.7539 0.8845
AF-Q32IQ2-F1-model_v4 43 308 1 248 0.7539 0.8845
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 43 294 1 280 0.5676 0.7075
AF-G0IWQ0-F1-model_v4 CE9 43 308 1 245 0.5272 0.8907
AF-A0A0H4PAS9-F1-model_v4 CE9 43 309 1 245 0.5265 0.8906
AF-A0A1W2H3T6-F1-model_v4 CE9 43 307 1 243 0.5234 0.8909
AF-J9UUU6-F1-model_v4 CE9 43 308 1 240 0.5052 0.8828
AF-K0JLB5-F1-model_v4 CE9 43 308 1 240 0.5023 0.8773
AF-A0A3B6VIU1-F1-model_v4 CE9 43 308 1 240 0.5013 0.8749
AF-D8I9Y7-F1-model_v4 CE9 43 308 1 240 0.5009 0.8745
AF-D5U6N5-F1-model_v4 CE9 43 308 1 240 0.5008 0.8744
AF-G0ELA3-F1-model_v4 CE9 43 308 1 240 0.5006 0.8734
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 43 294 1 280 0.5676 0.7075
A0A0H4PAS9 CE9 43 309 1 245 0.5265 0.8906
A0A3B6VIU1 CE9 43 308 1 240 0.5013 0.8749
U5ECU6 CE9 39 307 388 631 0.4939 0.8439
A0A871RFD9 GH3 23 307 970 1250 0.4466 0.794
A0A875S4F4 GH3 33 308 832 1287 0.4413 0.8036
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2bkv-assembly1.cif.gz_A 43 307 1 241 0.7774 0.8912
5hj5-assembly2.cif.gz_B 43 308 1 248 0.7551 0.8872
4tm7-assembly1.cif.gz_A 40 307 1 243 0.7492 0.8563
3oc6-assembly1.cif.gz_A 40 307 1 243 0.7451 0.853
7lqm-assembly2.cif.gz_D 43 308 1 248 0.7435 0.8748
7lqn-assembly2.cif.gz_I 40 308 1 249 0.7435 0.8626
7lqm-assembly1.cif.gz_A 43 307 1 243 0.7415 0.8742
1cd5-assembly1.cif.gz_A 43 308 1 248 0.7393 0.8685
3tx2-assembly1.cif.gz_A 38 307 1 246 0.7388 0.8423
1ne7-assembly1.cif.gz_E 43 308 1 248 0.7385 0.8795
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q97MK9-F1-model_v4 43 307 1 241 0.7854 0.8991
AF-C3L2N7-F1-model_v4 43 307 1 241 0.7838 0.9025
AF-C1FV12-F1-model_v4 43 307 1 241 0.7836 0.9023
AF-A8MIX7-F1-model_v4 43 307 1 241 0.7833 0.8969
AF-Q4L9T8-F1-model_v4 43 307 1 242 0.7832 0.8957
AF-B1IKY4-F1-model_v4 43 307 1 241 0.7828 0.9015
AF-A7FX73-F1-model_v4 43 307 1 241 0.7825 0.9011
AF-A5I5R9-F1-model_v4 43 307 1 241 0.7823 0.9009
AF-B1KZ07-F1-model_v4 43 307 1 241 0.7822 0.9009
AF-A7GH51-F1-model_v4 43 307 1 241 0.7821 0.9008
Download Full SwissProt Results