PROTEIN: k141_125562_10
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Protein File & Metadata
Source:
k141_125562_10.pdb
Genome ID:
Protein ID:
k141_125562_10
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Protein Sequence
MTMRDFRTNG SRQSIPNRTQ RMDHLSKRRN IFFNLLLYSL LIALPAFLDI SCRKAPSPVP 60 DGGEEPEVVD STLTVLHLQN SSRYAVEDVQ ILIYKSDGTR ELEQLLRLDE FTETVEVVTT 120 EGEKLVAAVA NCGKALSPVA LGRYDSLSKF GYDFSDENCE APVMSGECRT RGNMGEISLV 180 PLLCEVVIES VANCLDENYE LVENPRVRLT GISGYAGVMQ DSDFFPTEIQ DRGEWTDLPY 240 DIGMLTQNPG TTLYCYPNET PESSLGSSRT VLEFECEIFG RVCSFEIPLP PFGRGARLLV 300 ELEVFSQEDC QSRISVERPT AQGARPTE 328
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A4Y1WMN6-F1-model_v4 | GH28 | 50 | 321 | 9 | 261 | 0.4058 |
0.7108 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4Y1WMN6 | GH28 | 50 | 321 | 9 | 261 | 0.4058 |
0.7108 |
| I3YKC4 | GH28 | 68 | 322 | 31 | 275 | 0.4039 |
0.7309 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4gpv-assembly1.cif.gz_A | 68 | 323 | 5 | 325 | 0.6562 |
0.8447 |
| 4gpv-assembly2.cif.gz_B | 68 | 322 | 5 | 325 | 0.6546 |
0.8473 |
| 4jg5-assembly1.cif.gz_A | 67 | 322 | 1 | 333 | 0.6488 |
0.846 |
| 6jzk-assembly2.cif.gz_B | 69 | 322 | 1 | 339 | 0.6442 |
0.8505 |
| 6jzj-assembly1.cif.gz_A | 69 | 322 | 1 | 344 | 0.6361 |
0.8443 |
| 3r4r-assembly2.cif.gz_B | 70 | 319 | 1 | 259 | 0.636 |
0.7623 |
| 3r4r-assembly1.cif.gz_A | 67 | 319 | 1 | 268 | 0.6357 |
0.7634 |
| 3liu-assembly2.cif.gz_B | 48 | 320 | 1 | 373 | 0.612 |
0.7874 |
| 3liu-assembly1.cif.gz_A | 67 | 320 | 1 | 372 | 0.606 |
0.831 |
| 6kmf-assembly1.cif.gz_A | 82 | 310 | 7 | 307 | 0.5955 |
0.8363 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O32388-F1-model_v4 | 68 | 322 | 40 | 331 | 0.5851 |
0.8682 |
| AF-B2RH57-F1-model_v4 | 68 | 322 | 40 | 330 | 0.5849 |
0.869 |