PROTEIN: k141_28904_3
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Protein File & Metadata
Source:
k141_28904_3.pdb
Genome ID:
Protein ID:
k141_28904_3
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Protein Sequence
MKKLNYMHTV FFLFISMICW SCGGSDNTDI DGGKTDPDPE PPVTYVYTNL FSDSEYKKGF 60 NVSSTQEGNA EVHGILDYGD ITTSAPVWRI AQWNCINNDI FAGTYSLNGS VHTYKTAKGN 120 VVAADVEKGS LVLGINTSSE YGQNGITSNP RKSGESWPHL LIEYVLADKD ILKVDGKEEI 180 RMDIAYNVTQ LDDKMPAGTT NADLHTAQFQ WYVTVQNRTQ GSEDYGRYIW FGLNFFDKRY 240 EFPPAYAAQD GGKEHNTGAF IYVPEMSQIM GSQGKTAIGK DMHVDVDVLP IIKSAFKLAQ 300 ERKYLLNTTW EDLYITTSNI GWEVPGTYDV TVRIDSVNIK YR 342
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2H4R494-F1-model_v4 | GH12 | 56 | 342 | 13 | 235 | 0.556 |
0.7071 |
| A0A0C4F820 | GH12 | 43 | 342 | 30 | 303 | 0.5463 |
0.6518 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A1S0U6 | GH12 | 31 | 342 | 9 | 309 | 0.5739 |
0.6507 |
| A0A0C4F820 | GH12 | 43 | 342 | 30 | 303 | 0.5463 |
0.6518 |
| BDB99994.1 | GH12 | 40 | 342 | 35 | 313 | 0.5351 |
0.6666 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7w3v-assembly1.cif.gz_A | 57 | 342 | 1 | 222 | 0.5798 |
0.7197 |
| 3vlb-assembly2.cif.gz_D | 57 | 342 | 1 | 218 | 0.5773 |
0.7212 |
| 5m2d-assembly2.cif.gz_B | 59 | 342 | 1 | 220 | 0.5768 |
0.7179 |
| 1oa3-assembly4.cif.gz_D | 56 | 342 | 1 | 218 | 0.5764 |
0.7199 |
| 2jem-assembly2.cif.gz_B | 57 | 342 | 1 | 232 | 0.5758 |
0.7024 |
| 1olq-assembly2.cif.gz_B | 59 | 341 | 1 | 218 | 0.5755 |
0.7185 |
| 1oa2-assembly6.cif.gz_F | 56 | 342 | 1 | 218 | 0.5752 |
0.7183 |
| 1h8v-assembly6.cif.gz_F | 57 | 342 | 1 | 218 | 0.5747 |
0.7173 |
| 3b7m-assembly1.cif.gz_A | 56 | 342 | 1 | 216 | 0.5738 |
0.7205 |
| 4npr-assembly1.cif.gz_A | 57 | 342 | 1 | 221 | 0.5719 |
0.7114 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.