PROTEIN: C94_contig_2018_139
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Protein File & Metadata
Source:
C94_contig_2018_139.pdb
Genome ID:
Protein ID:
C94_contig_2018_139
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Protein Sequence
MNKRKEKIVE ILFLTGVFVF LLFWAVVQPF NASPDEAMKY QIVEYIMKYG TLPHGGDPEI 60 RHELWGISYA FNPILPYIAG AVFGKAALIF TSAEMAPVIA ARIVNVLFGT ATAALTIKTG 120 KKLFQKESSK VFVVLVCFLP GAVFINSYIN TDSIALFSTA WIVWCWVKAL KNGWGKGVCI 180 ELALALSVCA LSYYNAYGFI LCSVFFFAGS IMFCEDKSWN YKKMFSLGFL IIVVVVICAG 240 WWFVRNGILY HGDVLGMRTS SEYAQLYARE DLKPSNRITP QSQGMSIWEM LFWIPGEWKF 300 NWLVTVAVSF IGTFGFLDIF MPKAWSLVYI VVFAAGIAGV FFQIRRQFFV TGLQKSVRHA 360 KDNAGDTVYI TIRKNKRWDM KNYFHLCLLA AMVIPFILLV KYAYSSDFQA QGRYLMPMLI 420 PFMYFITLGY TNIMDKFVKS QKVKRWISNL FCIVYIASAI GVYIFVFVPN YM 472
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EYW2-F1-model_v4 | 1 | 472 | 21 | 488 | 0.6846 |
0.728 |
| AF-X8F0H0-F1-model_v4 | 1 | 472 | 34 | 503 | 0.6669 |
0.7164 |
| AF-K0EMC6-F1-model_v4 | 1 | 472 | 48 | 527 | 0.6622 |
0.7161 |
| AF-K0EZH5-F1-model_v4 | 1 | 472 | 34 | 527 | 0.6593 |
0.7184 |
| AF-Q9HUZ2-F1-model_v4 | 8 | 472 | 8 | 381 | 0.6387 |
0.8135 |
| AF-Q9P7Q9-F1-model_v4 | 2 | 472 | 7 | 401 | 0.616 |
0.8092 |
| AF-A0A1D8PE04-F1-model_v4 | 3 | 472 | 1 | 387 | 0.6126 |
0.8091 |
| AF-Q8ZP99-F1-model_v4 | 1 | 472 | 15 | 385 | 0.6114 |
0.8103 |
| AF-C1GUK5-F1-model_v4 | 1 | 472 | 25 | 426 | 0.608 |
0.798 |
| AF-A0A1C1CER1-F1-model_v4 | 2 | 472 | 14 | 414 | 0.6072 |
0.7892 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B1UML9-F1-model_v4 | GT39 | 3 | 472 | 1 | 405 | 0.7104 |
0.7933 |
| AF-W0AAL2-F1-model_v4 | GT39 | 1 | 472 | 11 | 405 | 0.708 |
0.809 |
| AF-A0A7Z2PMT4-F1-model_v4 | GT39 | 3 | 472 | 1 | 406 | 0.7077 |
0.7897 |
| AF-A0A160U6X0-F1-model_v4 | GT39 | 7 | 472 | 1 | 401 | 0.7065 |
0.7924 |
| AF-A0A1L3FLZ4-F1-model_v4 | GT39 | 1 | 472 | 3 | 412 | 0.7042 |
0.784 |
| AF-A0A5H2YTU8-F1-model_v4 | GT39 | 7 | 472 | 1 | 401 | 0.7034 |
0.7893 |
| AF-A0A1M5GVD1-F1-model_v4 | GT39 | 1 | 472 | 8 | 417 | 0.7019 |
0.7853 |
| AF-B0JHA2-F1-model_v4 | GT39 | 1 | 472 | 2 | 423 | 0.7013 |
0.7715 |
| AF-A0A0K1S4N0-F1-model_v4 | GT39 | 1 | 472 | 2 | 423 | 0.7009 |
0.7709 |
| AF-A0A2P1UGS1-F1-model_v4 | GT39 | 1 | 472 | 2 | 423 | 0.7004 |
0.7704 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S6H5E4 | GT39 | 1 | 472 | 1 | 398 | 0.7321 |
0.8239 |
| A5GCG9 | GT39 | 1 | 472 | 3 | 413 | 0.7173 |
0.7852 |
| D1CEC5 | GT39 | 1 | 472 | 15 | 427 | 0.7157 |
0.8044 |
| W0AAL2 | GT39 | 1 | 472 | 11 | 405 | 0.708 |
0.809 |
| A0A249L5K2 | GT39 | 1 | 472 | 3 | 401 | 0.704 |
0.7939 |
| WCO68223.1 | GT39 | 1 | 472 | 1 | 421 | 0.7004 |
0.7685 |
| A0A6F9WZW7 | GT39 | 1 | 472 | 11 | 407 | 0.7004 |
0.8022 |
| UTA49138.1 | GT39 | 1 | 472 | 5 | 450 | 0.6994 |
0.7533 |
| Q605T5 | GT39 | 1 | 472 | 25 | 431 | 0.6987 |
0.8008 |
| A0A7R6VNI1 | GT39 | 2 | 472 | 3 | 458 | 0.6954 |
0.7405 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7zlh-assembly1.cif.gz_A | 1 | 472 | 1 | 505 | 0.5664 |
0.668 |
| 7zli-assembly1.cif.gz_A | 1 | 472 | 1 | 511 | 0.5655 |
0.6694 |
| 7zlg-assembly1.cif.gz_A | 1 | 472 | 1 | 511 | 0.565 |
0.6701 |
| 8b6l-assembly1.cif.gz_I | 1 | 472 | 5 | 479 | 0.5297 |
0.636 |
| 5gmy-assembly1.cif.gz_A | 1 | 472 | 4 | 481 | 0.5175 |
0.6696 |
| 3wak-assembly1.cif.gz_A | 1 | 472 | 4 | 497 | 0.5154 |
0.6711 |
| 7e9s-assembly1.cif.gz_A | 1 | 472 | 3 | 496 | 0.5122 |
0.6678 |
| 3waj-assembly1.cif.gz_A | 6 | 472 | 1 | 426 | 0.5006 |
0.6931 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8NRZ6-F1-model_v4 | 1 | 472 | 29 | 506 | 0.673 |
0.7214 |
| AF-P9WN04-F1-model_v4 | 1 | 472 | 38 | 508 | 0.6696 |
0.7202 |
| AF-Q1MJ97-F1-model_v4 | 1 | 472 | 3 | 365 | 0.621 |
0.8248 |
| AF-Q9P7Q9-F1-model_v4 | 2 | 472 | 7 | 401 | 0.616 |
0.8092 |
| AF-O67270-F1-model_v4 | 6 | 472 | 1 | 396 | 0.616 |
0.7593 |
| AF-Q1MJ96-F1-model_v4 | 1 | 472 | 3 | 365 | 0.6138 |
0.8186 |
| AF-Q1MJ94-F1-model_v4 | 1 | 472 | 3 | 366 | 0.6115 |
0.8107 |
| AF-Q1MLH5-F1-model_v4 | 1 | 472 | 1 | 344 | 0.6059 |
0.8279 |
| AF-Q6BH65-F1-model_v4 | 1 | 472 | 33 | 406 | 0.6023 |
0.8135 |
| AF-A9R091-F1-model_v4 | 2 | 472 | 1 | 431 | 0.5943 |
0.7103 |