PROTEIN: C55_contig_1093_1943
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Protein File & Metadata
Source:
C55_contig_1093_1943.pdb
Genome ID:
Protein ID:
C55_contig_1093_1943
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Detailed structural information will appear here after analysis...
Protein Sequence
MIAKESSISN KDKIILISLF YFMIFQNVLE NYFNIFGILD EAMSAAIVII AIINILSSRR 60 KYVICKNNKK ILVSVLALII IGIIGNLKTD YQTMIPALKD AVCVLKGIIT YVFIPLCLSN 120 LNLDEYLTTM NNHLKFITGL VFLTVIANLL FDIFPYYEIR FGIKSQQIFF THPTYLASFS 180 VIIIILLSVN LREHEENKKY IILMLLVLAS TLRFKSIAFI PIYMYLYYIV FKKQRKLQLL 240 DVGILCVLGG VFAISQVMEY FNNPDWARNV LTMNSLNIAK DNFPIGTGFG TYASWASGES 300 YSNIYYDYNI STTWGISPDF YEFIADTFWP MIIGQFGVLG LGIYIYILLR IYKNIINNDN 360 LDYYFGQILA LLYLIILSIA EASFSGPIVV VYMALIAVLG NKKIGRLRL 409
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q329N3-F1-model_v4 | 1 | 404 | 2 | 412 | 0.6585 |
0.6959 |
| AF-Q9HUG6-F1-model_v4 | 8 | 409 | 15 | 396 | 0.6582 |
0.7201 |
| AF-Q5FA54-F1-model_v4 | 1 | 409 | 9 | 432 | 0.5941 |
0.7194 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q4JZZ9-F1-model_v4 | GT4 | 9 | 408 | 4 | 408 | 0.6705 |
0.7094 |
| AF-Q9K0K0-F1-model_v4 | GT0 | 1 | 409 | 9 | 432 | 0.5922 |
0.717 |
| AF-G1FG65-F1-model_v4 | GT0 | 1 | 409 | 9 | 432 | 0.5918 |
0.7164 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 6 | 409 | 3 | 501 | 0.5849 |
0.7421 |
| AF-M1FGR5-F1-model_v4 | GT2 | 3 | 409 | 1 | 502 | 0.5842 |
0.7382 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 6 | 409 | 2 | 577 | 0.5815 |
0.738 |
| AF-E4PMS8-F1-model_v4 | GT2 | 6 | 409 | 2 | 501 | 0.5796 |
0.7356 |
| QSP96058.1 | GT2 | 1 | 409 | 1 | 507 | 0.5788 |
0.7284 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 5 | 409 | 1 | 500 | 0.5757 |
0.7279 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 8 | 409 | 1 | 496 | 0.5752 |
0.7313 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 9 | 408 | 4 | 408 | 0.6705 |
0.7094 |
| QSP96058.1 | GT2 | 1 | 409 | 1 | 507 | 0.5788 |
0.7284 |
| A0A0H3AT40 | GT25 | 1 | 409 | 316 | 756 | 0.5606 |
0.7346 |
| A0A9Q9IL13 | GT4 | 1 | 409 | 6 | 888 | 0.5587 |
0.7815 |
| B5YD26 | GT9 | 6 | 409 | 39 | 478 | 0.5542 |
0.7409 |
| A0A517MXC4 | GT26 | 8 | 409 | 21 | 450 | 0.5497 |
0.7287 |
| WBY01952.1 | GT9 | 2 | 409 | 6 | 535 | 0.5441 |
0.7178 |
| D5MJ04 | GT9 | 6 | 409 | 23 | 542 | 0.5399 |
0.7192 |
| H8L3P3 | GT2 | 6 | 409 | 10 | 660 | 0.5263 |
0.6938 |
| K0J022 | GT4 | 5 | 409 | 1 | 754 | 0.5216 |
0.6899 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 6 | 407 | 1 | 374 | 0.6723 |
0.7327 |
| AF-Q9HUG6-F1-model_v4 | 8 | 409 | 15 | 396 | 0.6582 |
0.7201 |
| AF-Q02729-F1-model_v4 | 3 | 406 | 6 | 404 | 0.647 |
0.7076 |
| AF-Q6F7F9-F1-model_v4 | 6 | 408 | 3 | 410 | 0.6068 |
0.7161 |