PROTEIN: C34_contig_2004_886
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Protein File & Metadata
Source:
C34_contig_2004_886.pdb
Genome ID:
Protein ID:
C34_contig_2004_886
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Protein Sequence
MKRRKAVYAL GLSMALAAGM SFAGSAQEAE TDEYLSQIQG SYVELFPEFS KEENRATWEK 60 CAAEYVDADA VSDSIDYLLW MCMGDKYGQE AIDAFTADPD SMQFDCYFLG DVAEFTVDGN 120 TISGVDADGN EVFSHVYKAM DTDSEDFLFY ESEDADSGMF TYFAFSPDTP ESTYHLEFRY 180 ADNTDDLQSW FEGNYAYWNA AAISKDYNET MMDNCIGLFC SENLGGEEES ETEAVSEAES 240 EAATEAVTEA VTE 253
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7jjb-assembly1.cif.gz_A | 10 | 218 | 6 | 180 | 0.605 |
0.7464 |
| 6lm2-assembly1.cif.gz_A | 10 | 218 | 10 | 184 | 0.5906 |
0.737 |
| 4aw8-assembly1.cif.gz_A | 10 | 218 | 12 | 186 | 0.5845 |
0.7337 |
| 1txl-assembly1.cif.gz_A | 10 | 218 | 13 | 188 | 0.584 |
0.7331 |
| 5aq6-assembly1.cif.gz_A-2 | 10 | 218 | 15 | 190 | 0.5802 |
0.7317 |
| 7jj9-assembly1.cif.gz_A | 10 | 218 | 286 | 461 | 0.4084 |
0.7371 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5XD15-F1-model_v4 | 10 | 218 | 337 | 515 | 0.4002 |
0.7387 |
| AF-P0DF59-F1-model_v4 | 10 | 218 | 337 | 515 | 0.4002 |
0.7387 |
| AF-Q9A0L9-F1-model_v4 | 10 | 218 | 337 | 515 | 0.4001 |
0.7386 |
| AF-P0DF58-F1-model_v4 | 10 | 218 | 337 | 515 | 0.4 |
0.7385 |
| AF-Q8P1N2-F1-model_v4 | 10 | 218 | 337 | 515 | 0.3999 |
0.7382 |
| AF-O05703-F1-model_v4 | 10 | 218 | 326 | 501 | 0.3999 |
0.7423 |
| AF-Q8CWN2-F1-model_v4 | 10 | 218 | 326 | 501 | 0.3996 |
0.7417 |