PROTEIN: C34_contig_2004_302
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Protein File & Metadata
Source:
C34_contig_2004_302.pdb
Genome ID:
Protein ID:
C34_contig_2004_302
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Protein Sequence
MKKVTAAWQQ INRKIDGLWE RSPDHPADLF FVLLMGVFLF YLAWILPFNE APDEKMRYLV 60 PTYIYRHGTL PAGWDEEVLN KMWGISYAFH PILPYILGGY LMRIVGIFDS SEHALLMAAR 120 CINVFFGMGF YWYVLKISRR LFQNQVFRIY FVALLAMLPQ LLYLFVYVNT DGTAVFSSAM 180 LIYGWIFGME KKWDRKSCTH LAVGVAVCAM SYFNAYGFAL FSVVMFVGSL IVFYRKKGAK 240 ICTGIILKRG LYITAVVFLL CGWWFIRCAI LYDGDFLGLH APEKYGELYA QEEFKPSVKK 300 SLEEQGTPID EMLRSEDTGG MDWIRTTYRS TIGYFGYLKY PLGLDIYEIP KRLVLLGMVG 360 CVLCLLLAAV KLAWNLAVRW TKKEKVPVSF TIPGMKLHTA NFFLLQISFG CCIIIPILLS 420 LVYSYTDDFQ PQGRYIMPLI VPLAYFVAAG TQRIMTLFFK KWVGYLLMFP LLYAVLHVFL 480 AAFISVYIPT FVPSMGWLAD VRFPWFSNQG WIVTFLHLFI PG 522
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EYW2-F1-model_v4 | 19 | 505 | 21 | 497 | 0.6622 |
0.7238 |
| AF-P9WN05-F1-model_v4 | 19 | 504 | 38 | 515 | 0.648 |
0.7202 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D1CEC5-F1-model_v4 | GT39 | 5 | 505 | 4 | 436 | 0.7154 |
0.8042 |
| AF-A0A1S6H5E4-F1-model_v4 | GT39 | 20 | 505 | 1 | 407 | 0.7097 |
0.8162 |
| AF-G8SHT4-F1-model_v4 | GT39 | 20 | 504 | 17 | 472 | 0.676 |
0.7534 |
| AF-A0A5J6KQ93-F1-model_v4 | GT39 | 1 | 505 | 6 | 510 | 0.6717 |
0.707 |
| AF-A0A7L4YTD7-F1-model_v4 | GT39 | 17 | 505 | 2 | 469 | 0.671 |
0.7273 |
| AF-A0A7I7XLZ3-F1-model_v4 | GT39 | 22 | 504 | 1 | 473 | 0.6664 |
0.7197 |
| AF-A0A0M4LZT9-F1-model_v4 | GT39 | 19 | 504 | 4 | 499 | 0.6627 |
0.7139 |
| AF-K0EYW2-F1-model_v4 | GT39 | 19 | 505 | 21 | 497 | 0.6622 |
0.7238 |
| AF-D2S915-F1-model_v4 | GT39 | 18 | 504 | 38 | 500 | 0.6605 |
0.7446 |
| AF-A0A1V0AEZ5-F1-model_v4 | GT39 | 16 | 505 | 1 | 504 | 0.6602 |
0.7119 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D1CEC5 | GT39 | 5 | 505 | 4 | 436 | 0.7154 |
0.8042 |
| A5GCG9 | GT39 | 12 | 504 | 1 | 403 | 0.712 |
0.8273 |
| A0A1S6H5E4 | GT39 | 20 | 505 | 1 | 407 | 0.7097 |
0.8162 |
| A0A7D6ESH4 | GT39 | 13 | 503 | 2 | 424 | 0.6875 |
0.7813 |
| K9UL65 | GT39 | 10 | 507 | 1 | 470 | 0.6787 |
0.7364 |
| A0A060JML1 | GT39 | 8 | 504 | 3 | 473 | 0.6747 |
0.732 |
| A0A9E8S8J4 | GT39 | 2 | 504 | 7 | 535 | 0.6741 |
0.7288 |
| K0ZHU7 | GT39 | 17 | 505 | 4 | 474 | 0.6706 |
0.7271 |
| K9T1L7 | GT39 | 26 | 504 | 1 | 434 | 0.6701 |
0.7533 |
| A0A9E8TK76 | GT39 | 11 | 506 | 11 | 509 | 0.6681 |
0.7183 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WN05-F1-model_v4 | 19 | 504 | 38 | 515 | 0.648 |
0.7202 |
| AF-A4SQX1-F1-model_v4 | 18 | 517 | 1 | 404 | 0.5623 |
0.7377 |
| AF-C6DAW3-F1-model_v4 | 18 | 513 | 1 | 406 | 0.56 |
0.7381 |