dbCAN Logo

PROTEIN: C19_contig_582_2299

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
C19_contig_582_2299.pdb
Genome ID:
C19.bin_16
Protein ID:
C19_contig_582_2299

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MSIHFPDWVS   PALALARQTL   ESCHAPDSFD   FVGQIDETLP   REGYRMQLSP   MESGKQTLRL 60
SGGSDVGLMY   GAMDFVNRII   PAAEQAHKWM   FPYYFVNPFE   TGFAPMDETS   SPSVARRGLW 120
TWGHVIYDYR   GYLTNMARLK   LNELVIWNDF   APLNADEIVA   FAHGLGIRII   WGYSWGWDTS 180
IKTDLSDPLA   LHALEDSVVD   TFVRHYAALP   GDGIYFQSFT   ETAEEEHNGQ   IIADVVVRWV 240
NRVCARILTL   KPDLELQFGL   HATSVRNRMA   SIAAVDPRVR   IVWEDCGAFP   YAYMPENLTG 300
RAETAAFTDE   LAHLRPNASV   GVVFKGMICL   DWTTFVHRTA   PERIGEASET   AIAQRQPMAR 360
RIMRLVQSSW   LTNGGAMLDT   VRQLAVHEDS   QILALLEDGL   FDRQIWFPAA   LFAAALWDCG 420
QSIDQLIHET   ALRPDVVFA 439
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q0E8H9-F1-model_v4 1 439 87 584 0.6004 0.7138
AF-Q8CZ55-F1-model_v4 1 439 19 628 0.5848 0.7059
AF-O88325-F1-model_v4 6 439 23 560 0.5432 0.6945
AF-P54802-F1-model_v4 6 439 25 562 0.5406 0.6925
AF-Q9FNA3-F1-model_v4 5 439 42 627 0.5231 0.6873
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B2UPS8-F1-model_v4 GH20 1 439 52 544 0.6208 0.7014
AF-A0A7G6DXA6-F1-model_v4 GH20 1 439 52 544 0.6191 0.6995
AF-D4L3Y3-F1-model_v4 GH20 1 439 20 465 0.6169 0.7269
AF-P49010-F1-model_v4 GH20 1 439 85 581 0.6158 0.72
AF-D6PX67-F1-model_v4 GH20 1 439 85 580 0.6128 0.7162
A0A8G1TMS3 GH20 1 439 23 453 0.6121 0.7395
AF-J3JT78-F1-model_v4 GH20 1 439 78 578 0.6115 0.7137
AF-A0A410SD52-F1-model_v4 GH20 1 439 49 544 0.6111 0.69
AF-A0A3R5Y1F2-F1-model_v4 GH20 1 439 49 544 0.6111 0.69
AF-G1XEQ1-F1-model_v4 GH20 1 439 42 580 0.611 0.7129
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A3R7P9F1 GH20 1 439 20 457 0.6475 0.7032
A0A1H6MQ68 GH20 1 439 43 532 0.6266 0.7017
A0A8A4TV96 GH20 1 439 32 488 0.6166 0.7376
A8F7G5 GH20 1 439 18 459 0.6163 0.7244
Q9GPG8 GH20 1 439 85 581 0.6149 0.7189
WBY63973.1 GH20 1 439 19 466 0.6146 0.7257
A0A1J0GJT0 GH20 1 439 23 468 0.6132 0.7258
WFR57449.1 GH20 1 439 21 466 0.6129 0.7286
A0A1J0M5I9 GH20 1 439 78 580 0.6122 0.7148
A0A8G1TMS3 GH20 1 439 23 453 0.6121 0.7395
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3nsm-assembly1.cif.gz_A 1 439 61 557 0.6249 0.719
5y0v-assembly1.cif.gz_A 1 439 61 557 0.6242 0.7183
3vtr-assembly1.cif.gz_A 1 439 61 557 0.6235 0.7176
3wmb-assembly1.cif.gz_A 1 439 61 557 0.6226 0.7167
3s6t-assembly1.cif.gz_A 1 439 64 560 0.6218 0.7171
5a6b-assembly1.cif.gz_B 1 439 5 413 0.5901 0.7439
5a6a-assembly1.cif.gz_B 2 439 1 401 0.5859 0.7426
1mqq-assembly1.cif.gz_A-2 1 439 20 638 0.5749 0.704
1k9d-assembly1.cif.gz_A 1 439 19 632 0.5713 0.6978
1k9e-assembly1.cif.gz_A 1 439 20 633 0.5706 0.6973
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P49010-F1-model_v4 1 439 85 581 0.6161 0.7203
AF-Q06GJ0-F1-model_v4 1 439 83 579 0.6142 0.7172
AF-Q09LY5-F1-model_v4 1 439 23 641 0.5747 0.7053
AF-B3PC73-F1-model_v4 1 439 51 665 0.5556 0.7006
AF-P54802-F1-model_v4 6 439 25 562 0.5406 0.6925
AF-Q9FNA3-F1-model_v4 5 439 42 627 0.5231 0.6873
Download Full SwissProt Results