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PROTEIN: C104_contig_3749_1136

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Protein File & Metadata
Download PDB File
Source:
C104_contig_3749_1136.pdb
Genome ID:
C104.CMAG_5
Protein ID:
C104_contig_3749_1136

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRINIKITAA   ALVLTTLFAA   GCKKDKIKTG   KVMPEETPYA   YTVSQLGDDV   MPIMSYIAPM 60
GEVTVDGQTY   PSSITDEVYS   KLKELGINLM   DGVGFYGNED   WARANLEMCN   KYSMAALISS 120
GTWYSSFRSR   FYADGKITPF   TEMTEAQRKS   IENALFAGFE   KYADYDCFAG   INYTDELGIA 180
AAQSLKEAND   LFLAKYPDKL   MLNNCVGGGA   VAPTMQYNGF   TDEFAEKAGL   KETEIAKKIQ 240
NGWGWDSYIE   SFIDTVRPQV   FSYDDYPWRM   GMQKITPKFL   QELEYAAKFS   SQYKSAFWNF 300
IQTGKWIADE   NGDKCRLPSY   SEMSYQINAS   LAFGAQGIEC   FLISTVGDSG   SYSSDTLNGR 360
AKFVFDLEGN   TTELYEPLKK   VFDNVKSVDD   VLMKSVWKGV   METESLDVKM   NAIQTVSEGY 420
ALKKFNQVSA   ITSDSTYAIA   GCFNYGGHTA   LYVLNANTDK   TLSENADVTI   KFNQKVNGYG 480
IFGGKRSTFT   GNSFTIKSMA   PGEAALIVIN 510
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A175W6H1-F1-model_v4 34 510 14 401 0.5735 0.6776
AF-A0A175VZB8-F1-model_v4 26 510 75 562 0.5587 0.6257
AF-Q552H9-F1-model_v4 28 509 14 464 0.5425 0.6194
AF-X8FHE1-F1-model_v4 31 447 40 360 0.5399 0.7129
AF-U7Q0B0-F1-model_v4 26 510 71 646 0.5363 0.6362
AF-A0A0N4U8S0-F1-model_v4 18 486 6 399 0.5231 0.6032
AF-Q1L8D2-F1-model_v4 23 446 71 442 0.508 0.6486
AF-K7KUJ3-F1-model_v4 19 509 17 408 0.5039 0.7456
AF-Q54MV6-F1-model_v4 19 509 29 421 0.494 0.7562
AF-I1LY82-F1-model_v4 14 503 9 414 0.4779 0.7303
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B0C6E2-F1-model_v4 GH111 27 510 21 493 0.6833 0.7525
AF-A0A1G6TUH9-F1-model_v4 CBM66 38 510 41 621 0.6329 0.7553
AF-C5C1Z0-F1-model_v4 CBM66 39 510 43 624 0.6309 0.7559
AF-A0A1H1MJK6-F1-model_v4 CBM66 31 510 60 657 0.6291 0.759
AF-A0A1P9WRY3-F1-model_v4 GH140 22 510 26 452 0.6272 0.7182
AF-A0A7G5LS84-F1-model_v4 CBM66 32 510 59 642 0.6198 0.7402
AF-A0A7S7VYU4-F1-model_v4 GH39 30 510 24 436 0.5989 0.7022
AF-A0A2U3Q829-F1-model_v4 GH39 30 510 23 435 0.5963 0.6987
AF-A0A5P2CBS5-F1-model_v4 GH5_19 18 510 1 622 0.5926 0.6889
AF-A0A5P2C6Q6-F1-model_v4 GH5_19 19 510 1 622 0.5923 0.6898
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K6AWF3 GH111 32 510 46 503 0.6916 0.7748
B0C6E2 GH111 27 510 21 493 0.6833 0.7525
A0A1H1MJK6 CBM66 31 510 60 657 0.6291 0.759
A0A1P9WRY3 GH140 22 510 26 452 0.6272 0.7182
A0A2W1WK30 GH39 18 508 3 393 0.6203 0.7224
A0A7G5LS84 CBM66 32 510 59 642 0.6198 0.7402
WFB35353.1 GH39 25 510 1 474 0.6093 0.6535
A0A0A8JBJ0 GH39 34 386 13 336 0.5968 0.7544
A0A6B9GGC2 GH39 32 505 14 336 0.5935 0.7523
UFH49795.1 GH39 35 510 20 433 0.5923 0.6881
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7jjt-assembly1.cif.gz_A 44 510 12 513 0.5905 0.6599
4h41-assembly1.cif.gz_A 50 484 13 318 0.5749 0.7425
4h41-assembly1.cif.gz_B 50 484 20 322 0.5712 0.7486
4h41-assembly1.cif.gz_C 50 484 13 321 0.5712 0.7346
5axh-assembly1.cif.gz_A 20 510 32 585 0.5678 0.6416
6t7g-assembly2.cif.gz_DDD 13 509 1 658 0.5671 0.6642
7oms-assembly2.cif.gz_DDD 26 510 1 650 0.5662 0.6746
6t75-assembly2.cif.gz_DDD 23 509 1 652 0.566 0.6726
6t6g-assembly2.cif.gz_DDD 19 509 1 655 0.566 0.6687
7omi-assembly2.cif.gz_BBB 16 509 1 658 0.5658 0.6661
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5B833-F1-model_v4 23 446 29 387 0.5641 0.6985
AF-C7ASJ5-F1-model_v4 31 509 30 694 0.5586 0.6897
AF-O69315-F1-model_v4 51 510 1 645 0.532 0.6623
AF-O54315-F1-model_v4 51 510 1 645 0.5307 0.6605
AF-Q9X6C6-F1-model_v4 51 510 1 645 0.5299 0.6599
AF-B9LW38-F1-model_v4 51 510 1 691 0.5209 0.6699
AF-Q5AR04-F1-model_v4 23 506 85 433 0.5209 0.6975
AF-Q8A1G3-F1-model_v4 46 510 56 692 0.5125 0.6495
AF-O31529-F1-model_v4 41 510 1 660 0.4991 0.6165
AF-Q54MV6-F1-model_v4 19 509 29 421 0.494 0.7562
Download Full SwissProt Results