PROTEIN: BrooksB_2017_SRR5405894_bin.8_k119_6814_73
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Protein File & Metadata
Source:
BrooksB_2017_SRR5405894_bin.8_k119_6814_73.pdb
Genome ID:
Protein ID:
BrooksB_2017_SRR5405894_bin.8_k119_6814_73
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Protein Sequence
MTKVLFLNVT THGHINPSLG LVKELSDRGV EVVYFSNEEF REKIEAAGAV YRPYHYDLNI 60 FKKGFDVLLD HGLDVMQDIL RQIEGESFDA VIHSIAMPFS KQIAEYLHLP AISMLAVFMG 120 MQDFMQPDKT PLVGKFKAMN DAYLLEAKKS SRPFRFRCLL AFSI 164
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F483-F1-model_v4 | 1 | 164 | 1 | 221 | 0.5163 |
0.7754 |
| AF-O33282-F1-model_v4 | 2 | 164 | 1 | 203 | 0.5142 |
0.7404 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7U3Q5B5-F1-model_v4 | GT1 | 1 | 117 | 1 | 123 | 0.727 |
0.8957 |
| AF-A0A3G8WUW4-F1-model_v4 | GT1 | 1 | 117 | 1 | 127 | 0.7051 |
0.8795 |
| A0A497XUN8 | GT1 | 1 | 119 | 1 | 130 | 0.6988 |
0.8668 |
| AF-A0A143QD11-F1-model_v4 | GT1 | 1 | 123 | 1 | 147 | 0.6193 |
0.8524 |
| A0A1L8X245 | GT1 | 1 | 164 | 1 | 189 | 0.6048 |
0.8585 |
| AF-A0A345FU17-F1-model_v4 | GT1 | 1 | 164 | 1 | 189 | 0.6002 |
0.8524 |
| AF-A0A7U6QV14-F1-model_v4 | GT1 | 1 | 164 | 1 | 189 | 0.5992 |
0.8508 |
| AF-A0A1C3S907-F1-model_v4 | GT1 | 1 | 164 | 1 | 206 | 0.5984 |
0.7772 |
| AF-A0A0H3JBC0-F1-model_v4 | GT1 | 1 | 164 | 1 | 209 | 0.5923 |
0.8481 |
| AF-A9WU11-F1-model_v4 | GT1 | 1 | 164 | 55 | 201 | 0.5905 |
0.7424 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A497XUN8 | GT1 | 1 | 119 | 1 | 130 | 0.6988 |
0.8668 |
| WET78219.1 | GT1 | 2 | 138 | 1 | 155 | 0.6562 |
0.789 |
| A0A1L8X245 | GT1 | 1 | 164 | 1 | 189 | 0.6048 |
0.8585 |
| A0A6F8YQ41 | GT1 | 2 | 164 | 1 | 183 | 0.6005 |
0.7185 |
| A9WU11 | GT1 | 1 | 164 | 55 | 201 | 0.5905 |
0.7424 |
| WCT13455.1 | GT1 | 1 | 164 | 1 | 194 | 0.5784 |
0.8243 |
| A0A7W3W453 | GT1 | 1 | 164 | 2 | 200 | 0.5738 |
0.8216 |
| WHT15864.1 | GT1 | 1 | 164 | 1 | 144 | 0.5707 |
0.7346 |
| A0A0N7KL46 | GT1 | 1 | 162 | 2 | 217 | 0.5693 |
0.7007 |
| A0A1I9KXF5 | GT1 | 1 | 164 | 4 | 202 | 0.5652 |
0.824 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2iya-assembly2.cif.gz_B | 1 | 164 | 3 | 197 | 0.5596 |
0.7965 |
| 2iya-assembly1.cif.gz_A | 1 | 164 | 2 | 197 | 0.5589 |
0.7997 |
| 4m60-assembly1.cif.gz_A | 1 | 164 | 2 | 204 | 0.5556 |
0.7867 |
| 7vlb-assembly1.cif.gz_A | 2 | 164 | 1 | 190 | 0.5482 |
0.7843 |
| 3ia7-assembly2.cif.gz_A | 1 | 164 | 3 | 203 | 0.5458 |
0.785 |
| 2iyf-assembly1.cif.gz_A | 2 | 164 | 1 | 202 | 0.5452 |
0.7803 |
| 7xx4-assembly2.cif.gz_B | 2 | 164 | 1 | 202 | 0.5407 |
0.7795 |
| 6j31-assembly4.cif.gz_D | 1 | 164 | 3 | 197 | 0.5371 |
0.7673 |
| 7vm0-assembly1.cif.gz_B | 2 | 164 | 1 | 199 | 0.537 |
0.7806 |
| 6j31-assembly2.cif.gz_B | 1 | 164 | 4 | 197 | 0.5352 |
0.7643 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O34539-F1-model_v4 | 1 | 164 | 3 | 193 | 0.5551 |
0.794 |
| AF-Q54387-F1-model_v4 | 1 | 164 | 22 | 224 | 0.5423 |
0.7912 |
| AF-O31853-F1-model_v4 | 1 | 164 | 1 | 207 | 0.534 |
0.7718 |
| AF-O05496-F1-model_v4 | 1 | 164 | 1 | 197 | 0.5136 |
0.7364 |