PROTEIN: BrooksB_2017_SRR5405894_bin.8_k119_3854_18
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Protein File & Metadata
Source:
BrooksB_2017_SRR5405894_bin.8_k119_3854_18.pdb
Genome ID:
Protein ID:
BrooksB_2017_SRR5405894_bin.8_k119_3854_18
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Protein Sequence
MLTLKLIDNE GNIVEERSHA EETYLAYKTR AYSNGEEIVL ESSEVNCFVW VQVDEALPAS 60 LIYLTENQWV FPIITDPELR RAYSPKIFSG ERHYIRAFKP KSYELENHRN LALNAHDQKA 120 DSGAYPHAFA NVETRNDSTF FARNAIDGML ANEDHGSFPY QSWGINQQED AQITIDFGRE 180 ILTDKIALVL RGDYPHDSYW EKVTLEFSDG EQLLLETSNV HDRQYFSYKP KRTRTVTLKQ 240 LIKHTDDSPF PALTEFEVYG QEIQLEGGS 269
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3TV70-F1-model_v4 | 107 | 264 | 1 | 140 | 0.6402 |
0.8591 |
| AF-Q1ED21-F1-model_v4 | 107 | 264 | 1 | 141 | 0.6339 |
0.8489 |
| AF-A0A0N4STS3-F1-model_v4 | 106 | 264 | 163 | 310 | 0.4271 |
0.8145 |
| AF-Q8IKW0-F1-model_v4 | 48 | 269 | 216 | 694 | 0.3307 |
0.6011 |
| AF-Q8I252-F1-model_v4 | 19 | 269 | 309 | 723 | 0.3175 |
0.5417 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2Z2KAG6-F1-model_v4 | CBM32 | 106 | 262 | 20 | 161 | 0.5865 |
0.8478 |
| AF-A0A3Q8X9B7-F1-model_v4 | CBM32 | 104 | 263 | 24 | 166 | 0.5778 |
0.8414 |
| B1C4D3 | GH105 | 1 | 268 | 37 | 652 | 0.5716 |
0.9222 |
| A0A2E9GC66 | CBM32 | 105 | 261 | 32 | 176 | 0.5643 |
0.8309 |
| AF-A0A346DVI5-F1-model_v4 | CBM47 | 5 | 267 | 7 | 436 | 0.4473 |
0.5839 |
| A0A9E9K109 | CBM32 | 7 | 269 | 1 | 557 | 0.4436 |
0.6201 |
| AF-A0A5B9GFR0-F1-model_v4 | CBM47 | 5 | 268 | 8 | 437 | 0.4354 |
0.5671 |
| AF-A0A858MSU4-F1-model_v4 | CBM32 | 107 | 265 | 178 | 324 | 0.4145 |
0.809 |
| AF-B0RRN5-F1-model_v4 | GH43_29 | 27 | 265 | 93 | 518 | 0.4097 |
0.6122 |
| AF-A0A061B3V4-F1-model_v4 | AA14 | 9 | 261 | 25 | 456 | 0.3943 |
0.6431 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 268 | 37 | 652 | 0.5716 |
0.9222 |
| A0A2E9GC66 | CBM32 | 105 | 261 | 32 | 176 | 0.5643 |
0.8309 |
| UVH36227.1 | CBM47 | 1 | 266 | 195 | 490 | 0.4581 |
0.6269 |
| B3VLC2 | CBM47 | 102 | 265 | 124 | 270 | 0.4497 |
0.817 |
| F2VQW1 | CBM47 | 103 | 269 | 18 | 288 | 0.4468 |
0.7651 |
| A0A9E9K109 | CBM32 | 7 | 269 | 1 | 557 | 0.4436 |
0.6201 |
| Q1D2P6 | CBM32 | 10 | 261 | 109 | 407 | 0.4432 |
0.5769 |
| A0A1Y0FYD6 | CBM32 | 1 | 261 | 296 | 510 | 0.436 |
0.7057 |
| Q2LK84 | CBM47 | 102 | 261 | 131 | 306 | 0.4341 |
0.7637 |
| A0A410GHY9 | CBM47 | 106 | 267 | 160 | 317 | 0.4303 |
0.7733 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8ivw-assembly3.cif.gz_G | 1 | 269 | 6 | 402 | 0.462 |
0.5674 |
| 8ivx-assembly1.cif.gz_A | 1 | 269 | 5 | 405 | 0.4606 |
0.5681 |
| 3cqo-assembly1.cif.gz_C | 106 | 269 | 1 | 157 | 0.46 |
0.809 |
| 4qdr-assembly1.cif.gz_A | 103 | 269 | 1 | 313 | 0.4375 |
0.7454 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3TV70-F1-model_v4 | 107 | 264 | 1 | 140 | 0.6402 |
0.8591 |
| AF-Q1ED21-F1-model_v4 | 107 | 264 | 1 | 141 | 0.6339 |
0.8489 |
| AF-B0VP26-F1-model_v4 | 2 | 265 | 88 | 336 | 0.4955 |
0.6044 |
| AF-Q6F6Y1-F1-model_v4 | 1 | 263 | 88 | 334 | 0.4933 |
0.6056 |
| AF-Q5YP02-F1-model_v4 | 2 | 264 | 87 | 329 | 0.488 |
0.6057 |
| AF-Q9RKU4-F1-model_v4 | 2 | 268 | 118 | 369 | 0.4806 |
0.6069 |