PROTEIN: BrooksB_2017_SRR5405658_bin.3_k141_9460_7
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Protein File & Metadata
Source:
BrooksB_2017_SRR5405658_bin.3_k141_9460_7.pdb
Genome ID:
Protein ID:
BrooksB_2017_SRR5405658_bin.3_k141_9460_7
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Protein Sequence
MIAASQYNLI ITIVTRGYSE QVMKAAKLGG ATGGTILLAR GAGMHEAEKI LGFSIHPEKE 60 IVLILTLQEK KQDIMRAICQ NCGFCTEARG MSIAVPVEDA MGLPVADMER ELQAHELPRT 120 GTE 123
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z1P6-F1-model_v4 | 1 | 113 | 5 | 114 | 0.7706 |
0.9111 |
| AF-Q58740-F1-model_v4 | 7 | 112 | 1 | 111 | 0.6864 |
0.7968 |
| AF-Q9ZST4-F1-model_v4 | 4 | 111 | 71 | 187 | 0.5417 |
0.7697 |
| AF-Q6AUR2-F1-model_v4 | 4 | 111 | 80 | 196 | 0.5274 |
0.77 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2ns1-assembly1.cif.gz_B | 6 | 111 | 1 | 111 | 0.6974 |
0.8078 |
| 2j9d-assembly3.cif.gz_H | 5 | 110 | 1 | 101 | 0.6928 |
0.7959 |
| 2j9e-assembly1.cif.gz_A | 5 | 111 | 1 | 108 | 0.6887 |
0.7934 |
| 1hwu-assembly3.cif.gz_B | 7 | 111 | 1 | 101 | 0.6853 |
0.7816 |
| 7p4v-assembly1.cif.gz_A | 6 | 111 | 1 | 111 | 0.6819 |
0.7942 |
| 7p50-assembly1.cif.gz_C | 4 | 111 | 1 | 113 | 0.6801 |
0.7862 |
| 2j9d-assembly3.cif.gz_G | 3 | 111 | 1 | 102 | 0.6799 |
0.7818 |
| 6ntb-assembly1.cif.gz_B | 1 | 108 | 1 | 98 | 0.6788 |
0.7915 |
| 2j9d-assembly4.cif.gz_L | 5 | 112 | 1 | 113 | 0.676 |
0.7819 |
| 6mm2-assembly1.cif.gz_A | 1 | 101 | 1 | 99 | 0.6729 |
0.7819 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O26760-F1-model_v4 | 4 | 111 | 1 | 113 | 0.7182 |
0.8265 |
| AF-Q58740-F1-model_v4 | 7 | 112 | 1 | 111 | 0.6864 |
0.7968 |
| AF-Q8PYW7-F1-model_v4 | 4 | 111 | 1 | 115 | 0.6849 |
0.7964 |
| AF-B8ZYW0-F1-model_v4 | 1 | 111 | 5 | 120 | 0.6848 |
0.7946 |
| AF-O26758-F1-model_v4 | 4 | 111 | 1 | 113 | 0.681 |
0.79 |
| AF-P73954-F1-model_v4 | 1 | 112 | 1 | 110 | 0.6798 |
0.7584 |
| AF-O28524-F1-model_v4 | 2 | 111 | 7 | 119 | 0.6761 |
0.7838 |
| AF-O29284-F1-model_v4 | 2 | 111 | 7 | 119 | 0.6755 |
0.7829 |
| AF-P0CW49-F1-model_v4 | 6 | 105 | 1 | 108 | 0.6694 |
0.801 |
| AF-Q9ZST4-F1-model_v4 | 4 | 111 | 71 | 187 | 0.5417 |
0.7697 |