PROTEIN: Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_24324_33
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Protein File & Metadata
Source:
Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_24324_33.pdb
Genome ID:
Protein ID:
Baumann-DudenhoefferAM_2018_SRR7217651_bin.6_k141_24324_33
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Protein Sequence
MIDYRFDGRI SKEVLENYLS RAVTAAGLFE SETLSDDLRV IRELGVKFLG RASGIWYMTE 60 DDDVHFAKSR ELAEKVHEVD PEIILQACIF ECVTQRMESV KIPEFVFRDF GMEPKDRCFC 120 LADTLFPGEP AGFVSHREEP EKNGGIPDLN RQEARMWFYY RAARYIDCGY EALHMGQVHL 180 YTANDRGMVK TQELFEMIRR YAAVHGRRHK VLLDAHTHGV NRRGKLLFDY HAMPFTRVPL 240 LEREGTDLVL VREGYSEGGL NPNGWSAQAM PYLMEYDNWG GLAVDDPARY SREELALKDW 300 WGYDQIAWFA HQSLEERNHF LEYTYRWLEV NNVCGFFEIP FRRMLSDAPV TMEHADSGVK 360 DIQTFYQINK KSPSCPMGFG QEDTVKGLWQ EGHRLRELAA NPELQIAYGA GEVYDPETGI 420 KLPEKVVVYG SFQPYVGAVK NDSNSEVTRM YYIGNNTYTL SVVIPYAGTY DFAVSTYGTL 480 SATYCGDGYP RSGSSNKGTF TAEKDNAAVR FRFDFTDCTV EVEVFEC 527
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-I1KBP5-F1-model_v4 | 4 | 527 | 22 | 413 | 0.4384 |
0.6609 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7Z2VP05-F1-model_v4 | CBM23 | 1 | 527 | 29 | 730 | 0.5753 |
0.7238 |
| AF-A0A344UVR1-F1-model_v4 | GH13 | 9 | 527 | 6 | 416 | 0.5677 |
0.6592 |
| AF-A0A7L9SWL0-F1-model_v4 | GH13 | 9 | 527 | 9 | 432 | 0.5612 |
0.645 |
| AF-A0A181ZFA1-F1-model_v4 | GH13 | 9 | 527 | 12 | 448 | 0.5518 |
0.6259 |
| AF-A0A6H0ASS9-F1-model_v4 | GH27 | 19 | 524 | 1 | 408 | 0.542 |
0.6268 |
| AF-A0A2Z5GBB3-F1-model_v4 | GH27 | 19 | 512 | 1 | 411 | 0.5409 |
0.6249 |
| AF-D7CBV6-F1-model_v4 | GH27 | 19 | 512 | 1 | 410 | 0.5363 |
0.6265 |
| AF-A0A1D9NXK8-F1-model_v4 | GH27 | 7 | 527 | 3 | 430 | 0.5357 |
0.614 |
| AF-D5VJA3-F1-model_v4 | GH27 | 8 | 521 | 33 | 448 | 0.5337 |
0.6332 |
| AF-A0A1G7MGJ1-F1-model_v4 | GH27 | 8 | 525 | 23 | 443 | 0.5325 |
0.6228 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7Z2VP05 | CBM23 | 1 | 527 | 29 | 730 | 0.5753 |
0.7238 |
| A0A9Q5WJV8 | GH13 | 14 | 527 | 1 | 404 | 0.5652 |
0.6576 |
| W0IA35 | GH5_19 | 13 | 523 | 1 | 400 | 0.562 |
0.6533 |
| A0A7J5LFD2 | GH13 | 11 | 526 | 25 | 435 | 0.5595 |
0.6593 |
| A0A810DV43 | GH27 | 7 | 527 | 12 | 450 | 0.5534 |
0.6301 |
| A0A6M8VDW8 | GH13 | 9 | 527 | 27 | 446 | 0.5483 |
0.6419 |
| BDO42930.1 | GH13_20 | 9 | 525 | 15 | 469 | 0.5411 |
0.6066 |
| A0A2S1LUN2 | GH13 | 9 | 525 | 45 | 467 | 0.5401 |
0.643 |
| BCM93998.1 | GH27 | 9 | 514 | 26 | 445 | 0.5265 |
0.6175 |
| A0A5D0WRS8 | GH27 | 7 | 523 | 49 | 467 | 0.5248 |
0.6295 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1wzm-assembly1.cif.gz_A | 10 | 525 | 123 | 584 | 0.4988 |
0.6044 |
| 1jf5-assembly1.cif.gz_A | 10 | 525 | 123 | 584 | 0.4988 |
0.6041 |
| 1ji2-assembly1.cif.gz_B | 10 | 525 | 123 | 584 | 0.4984 |
0.6039 |
| 1wzl-assembly1.cif.gz_A | 10 | 525 | 123 | 584 | 0.4984 |
0.6038 |
| 4cn1-assembly1.cif.gz_B | 2 | 526 | 27 | 648 | 0.4662 |
0.5289 |
| 3a23-assembly2.cif.gz_B | 11 | 520 | 4 | 528 | 0.427 |
0.4842 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.