PROTEIN: Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_3636_5
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Protein File & Metadata
Source:
Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_3636_5.pdb
Genome ID:
Protein ID:
Baumann-DudenhoefferAM_2018_SRR7217540_bin.1_k141_3636_5
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Protein Sequence
MSRSIRVCSY LLLPLIYLLV NVKLFQLGES FPITIVTFLP VLLLLYVERI NLKKLMLALM 60 LGAGLTLFNF IFGKSLDASK YVTSTMLFVY IVIIIGMVWS IRFKTISPHN YRKILRFFYM 120 VVALIVTLAA MEMAQIILTG GSSLMEIISK YLIYSNSYVL NFIKFGGKRT TALYFEPAFF 180 ALALISIWLS IKQFGIKTPK TDAMILAGIV LSGSFSGVMT FIMFYLLEWA FQYLNKEAIQ 240 KKLPLAIISL AVFVVGLVFA FPYIATRIGD LGTEGSSSYY RIIGPLVMVG YSLTNIDGVV 300 RFGSLYEYVA SFGIFNGADV GKTIDNGLYL LIIYFSWLAV ILTGWYMFKV AKMTMNAFGN 360 NQNFRVQLFL FTPISLFFTG SIFSPEYAFL IVCPFILRKA LNIVSS 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 405 | 1 | 405 | 0.9767 |
0.984 |
| AF-H9L488-F1-model_v4 | 1 | 404 | 1 | 404 | 0.9736 |
0.9823 |
| AF-Q2G288-F1-model_v4 | 4 | 406 | 5 | 410 | 0.6858 |
0.7222 |
| AF-Q9I1M9-F1-model_v4 | 4 | 406 | 39 | 453 | 0.6686 |
0.7484 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 4 | 406 | 18 | 448 | 0.5592 |
0.7376 |
| UII34295.1 | GT4 | 1 | 406 | 6 | 418 | 0.5462 |
0.725 |
| AF-E6U9X7-F1-model_v4 | GT0 | 1 | 406 | 2 | 423 | 0.5403 |
0.7213 |
| AF-A0A386XPQ4-F1-model_v4 | GT0 | 1 | 406 | 29 | 450 | 0.5346 |
0.7214 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 4 | 406 | 18 | 448 | 0.5592 |
0.7376 |
| UII34295.1 | GT4 | 1 | 406 | 6 | 418 | 0.5462 |
0.725 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 405 | 1 | 405 | 0.9767 |
0.984 |
| AF-Q00474-F1-model_v4 | 26 | 405 | 1 | 394 | 0.626 |
0.6851 |