PROTEIN: BackhedF_2015_ERR525949_bin.8_k119_12542_23
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Protein File & Metadata
Source:
BackhedF_2015_ERR525949_bin.8_k119_12542_23.pdb
Genome ID:
Protein ID:
BackhedF_2015_ERR525949_bin.8_k119_12542_23
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Protein Sequence
MDKIFLQNEY KKIFSRIVNG DNITVLRYGD GERAIMTGEK VVAQEGWSSE GESPLAVALR 60 ESLNFTDDNV YYGISCPCCD RPAYYWYSTR IASKQITFAN LFVNSNYQTF KSDFLTLTRD 120 AIVIANHAGK NNRIGNLNVL KYYAVGDDCI SCWEEECGSI VSRIISEYGS RDNLLYVVSA 180 GPMAEPIIAE LYKHNPNNCY IDFGSSIDIY IHGSDTRPYS KPGTVYSKRN CWMFDPNTAD 240 FDVSVVLTTY KKPESLTEQL AAIDKQTLRP REIRLFKDAI DGFYSIDLND EFLSSFDDCC 300 IAKCNRGVWG RFDYARECKS KYVCLFDDDT IPGDCWLESC HFEMMQHEGI YGTIGIVLEN 360 SSGYPIDKRS YYRVGWAEPN EQLMEVDFVG HSWFLPRRAL DYMFENTEQL QQYKVAAEDM 420 TLSAKALQYG LSTFVPPHPY DNKRVWGSDS SLAMHFGQAS GSLSMNVSNL RKMESAIVEL 480 TKTGASFLFQ RNPGLVKMQK RILNRYHNVE LMKHYLKVIH RKVFRRNKG 529
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1D6MBB8-F1-model_v4 | 42 | 507 | 65 | 744 | 0.4542 |
0.5992 |
| AF-Q53WK1-F1-model_v4 | 42 | 510 | 65 | 744 | 0.4525 |
0.5945 |
| AF-K7VSI1-F1-model_v4 | 34 | 507 | 57 | 745 | 0.4512 |
0.5876 |
| AF-Q9FF50-F1-model_v4 | 10 | 496 | 303 | 892 | 0.3759 |
0.5154 |
| AF-A0A1D6HNS3-F1-model_v4 | 10 | 496 | 303 | 893 | 0.3744 |
0.5139 |
| AF-K7LQF5-F1-model_v4 | 10 | 496 | 319 | 908 | 0.3741 |
0.5176 |
| AF-Q6K8F2-F1-model_v4 | 10 | 496 | 297 | 890 | 0.3726 |
0.5102 |
| AF-K7LTK6-F1-model_v4 | 10 | 496 | 317 | 906 | 0.3715 |
0.5133 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UQZ91024.1 | GT0 | 1 | 527 | 16 | 689 | 0.77 |
0.9376 |
| A0A3G5A480 | GT0 | 2 | 497 | 72 | 398 | 0.4584 |
0.8099 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q53WK1-F1-model_v4 | 42 | 510 | 65 | 744 | 0.4525 |
0.5945 |