dbCAN Logo

PROTEIN: B43_contig_1353_539

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
B43_contig_1353_539.pdb
Genome ID:
B43.CMAG_3
Protein ID:
B43_contig_1353_539

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MAVKFLEDVG   AKLINATRKE   MVNAIFAASG   RVVIGETVTF   KQSMIDGVSN   IELLKSWGCD 60
MVTINHYNVN   FPMIPGMEST   QAGIEQFGSC   FNEAGSKGCK   PSTKVIENSF   QKIFWQFGFG 120
ATIGDVKRLV   GVPVGMTLEP   VTEEDDYPQG   RVANEENARR   GAEQGASYIT   LIHTPQMSAG 180
EFAKSVAQVR   SGMGEMGLVK   AGKMPWGGCS   FLVNADEFVT   EAEIKELAAA   GADAIVLPTP 240
GTVPGLTIEL   VRQWVTVVHN   CGLLAEATIG   TSQEGADPDV   IRRFAIDSKM   TGADLFQIGD 300
SVYGGCCTPE   NVMSFARAIK   GQRHTLRRAA   LSPLR 335
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A132P1I0-F1-model_v4 1 335 1 308 0.8326 0.8801
AF-O22765-F1-model_v4 9 321 5 275 0.6217 0.7104
AF-I1N9L7-F1-model_v4 10 320 43 311 0.5858 0.712
AF-Q42529-F1-model_v4 10 321 44 312 0.5858 0.7125
AF-Q6ZL61-F1-model_v4 8 320 57 329 0.5781 0.7118
AF-Q9VTI0-F1-model_v4 7 328 27 340 0.5716 0.6406
AF-Q32LQ4-F1-model_v4 6 330 1 321 0.5624 0.6513
AF-K0END0-F1-model_v4 23 330 1 260 0.5581 0.7332
AF-A0A175WAT7-F1-model_v4 9 324 1 288 0.5434 0.6068
AF-Q32EA9-F1-model_v4 8 324 1 284 0.5398 0.6044
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-H8KQH3-F1-model_v4 GH27 17 324 24 298 0.5177 0.6854
AF-A0A6I6DDX7-F1-model_v4 GH18 28 328 143 417 0.4913 0.6634
AF-A0A3S8RPW0-F1-model_v4 CBM12 , GH18 14 325 188 488 0.4878 0.6477
AF-D3EL61-F1-model_v4 CBM12 , GH18 17 325 184 485 0.4875 0.6437
AF-A0A160P4M9-F1-model_v4 CBM16 , GH18 14 324 265 565 0.4617 0.6447
AF-A0A410WR28-F1-model_v4 CBM12 , GH18 17 325 281 583 0.4557 0.6398
AF-E8NFF8-F1-model_v4 GH18 2 324 277 678 0.4128 0.5935
AF-A0A2L0WMX7-F1-model_v4 GH0 , GH13_3 18 324 6 326 0.3861 0.6401
AF-A0A4Y5Z1Z4-F1-model_v4 GH0 , GH13_3 2 295 472 988 0.3192 0.5462
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
F8L3S1 GH18 26 322 2 271 0.6236 0.7158
A0A1W5LFL7 GH13 26 325 9 325 0.5657 0.6387
C8XC10 GH18 14 324 60 334 0.5594 0.6903
H8KQH3 GH27 17 324 24 298 0.5177 0.6854
ALX07495.1 GH18 28 335 144 425 0.4973 0.671
I7CUS4 CBM5 , GH18 26 324 168 453 0.4784 0.6463
A0A7L8UK44 GH51 2 330 53 544 0.4777 0.6229
C9RIQ1 GH13_3 2 328 30 476 0.4462 0.5834
F2RLK1 CBM16 , GH18 17 325 323 620 0.4441 0.6459
A0A385TH69 GH173 26 333 45 556 0.4271 0.6632
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2fjk-assembly1.cif.gz_C 10 328 1 299 0.6095 0.6631
1tjr-assembly2.cif.gz_B 14 320 1 255 0.6086 0.7084
5ud0-assembly1.cif.gz_A 10 328 1 282 0.6066 0.6768
3n9s-assembly1.cif.gz_B 10 328 1 295 0.6059 0.6629
3c52-assembly1.cif.gz_B 10 328 1 295 0.6002 0.6581
3n9r-assembly4.cif.gz_P 10 328 1 297 0.5977 0.6538
5usw-assembly1.cif.gz_A 3 324 2 272 0.5717 0.66
3c52-assembly1.cif.gz_A 8 324 1 296 0.5352 0.5895
5ud0-assembly1.cif.gz_B 15 335 1 291 0.53 0.5864
3n9s-assembly1.cif.gz_A 8 324 1 307 0.5266 0.5709
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8TUZ9-F1-model_v4 29 320 1 237 0.6522 0.7784
AF-Q5WKY5-F1-model_v4 10 328 1 286 0.6022 0.6773
AF-Q9PPP3-F1-model_v4 11 335 2 290 0.5973 0.6635
AF-B2V959-F1-model_v4 4 324 6 241 0.5952 0.757
AF-Q0S4F8-F1-model_v4 23 330 1 260 0.556 0.7349
AF-Q0TFZ6-F1-model_v4 8 324 1 284 0.5412 0.6057
AF-A6TEF4-F1-model_v4 8 324 1 284 0.5411 0.6053
AF-B7MEF1-F1-model_v4 8 324 1 284 0.541 0.6056
AF-A7ZNR5-F1-model_v4 8 324 1 284 0.5407 0.6052
AF-B1LN92-F1-model_v4 7 324 1 284 0.5404 0.6049
Download Full SwissProt Results