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PROTEIN: B43_contig_1353_2305

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Protein File & Metadata
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Source:
B43_contig_1353_2305.pdb
Genome ID:
B43.CMAG_3
Protein ID:
B43_contig_1353_2305

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Detailed structural information will appear here after analysis...

Protein Sequence 
MQEYVITRED   LRRWCSIPLE   KLEQQPNQKM   KLILRERERD   VAAEVGNLLA   EEVIRNNRSH 60
KPTRWILPGG   PAQQYDVFTE   RVNRESISLK   NLHIFHMDTW   LDWQYRLFPP   ENTRFSCKAK 120
MEKIFYGKIN   PSLNVPEAQR   YFPDPLEPDR   FDEAIEELGG   IDTLVGGVGC   KGLVAFNECP 180
ASPYHRVSLE   EYAQSKSRIV   TLREDTIIAY   AEREFGACFD   ALPPNAFTIG   MKSMLKAQRA 240
VFVVTTGAWK   QTVVRVALFS   EPTTEYPVTL   FPRYVPECVL   YCDRGTADHV   ISRKYQDIPI 300
LK 302
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q04802-F1-model_v4 30 290 1 245 0.7913 0.8925
AF-Q2G0K8-F1-model_v4 30 289 1 241 0.7911 0.9126
AF-A0A132YZ81-F1-model_v4 30 292 1 233 0.7839 0.8982
AF-Q9XVJ2-F1-model_v4 30 292 1 248 0.7839 0.9064
AF-A0A3Q0KJ37-F1-model_v4 30 292 1 249 0.7809 0.8805
AF-Q8DPA1-F1-model_v4 30 293 1 235 0.7802 0.8913
AF-Q8ZQX7-F1-model_v4 30 292 1 249 0.7799 0.8969
AF-A0A0H3GK04-F1-model_v4 30 292 1 249 0.7797 0.8967
AF-Q32IQ2-F1-model_v4 30 292 1 249 0.7796 0.8967
AF-Q54XK9-F1-model_v4 30 292 1 252 0.7784 0.8866
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 30 273 1 279 0.5805 0.7321
AF-A0A0H4PAS9-F1-model_v4 CE9 30 297 1 249 0.5409 0.8814
AF-G0IWQ0-F1-model_v4 CE9 30 296 1 249 0.5377 0.8757
AF-A0A1W2H3T6-F1-model_v4 CE9 30 302 1 266 0.5333 0.8166
AF-J9UUU6-F1-model_v4 CE9 30 292 1 241 0.5171 0.8819
AF-K0JLB5-F1-model_v4 CE9 30 292 1 241 0.514 0.8762
AF-D8I9Y7-F1-model_v4 CE9 30 292 1 241 0.5135 0.8752
AF-G0ELA3-F1-model_v4 CE9 30 292 1 241 0.5131 0.8744
AF-A0A3B6VIU1-F1-model_v4 CE9 30 292 1 241 0.5128 0.874
AF-A0A3B6VCF9-F1-model_v4 CE9 30 292 1 241 0.5123 0.8731
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A5Z828 GH20 30 273 1 279 0.5805 0.7321
A0A0H4PAS9 CE9 30 297 1 249 0.5409 0.8814
A0A3B6VIU1 CE9 30 292 1 241 0.5128 0.874
U5ECU6 CE9 28 292 390 633 0.509 0.8544
A0A871RFD9 GH3 1 293 883 1250 0.4755 0.7935
A0A875S4F4 GH3 14 296 772 1290 0.4671 0.8105
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2bkv-assembly1.cif.gz_A 30 292 1 241 0.8023 0.9055
5hj5-assembly2.cif.gz_B 30 292 1 249 0.7779 0.8965
7lqn-assembly2.cif.gz_I 29 292 1 250 0.7723 0.8784
7lqm-assembly2.cif.gz_D 30 292 1 249 0.7712 0.8893
7lqm-assembly1.cif.gz_A 30 292 1 245 0.7676 0.8839
1cd5-assembly1.cif.gz_A 30 292 1 249 0.7664 0.8826
7lqm-assembly1.cif.gz_B 30 292 1 247 0.7646 0.8854
1ne7-assembly1.cif.gz_E 30 292 1 249 0.7634 0.8916
7lqm-assembly2.cif.gz_C 30 292 1 239 0.7584 0.8916
4r7t-assembly1.cif.gz_C 30 292 1 247 0.7563 0.8747
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4L9T8-F1-model_v4 30 292 1 242 0.8111 0.9126
AF-Q8CTR3-F1-model_v4 30 292 1 242 0.8087 0.9119
AF-Q49VB6-F1-model_v4 30 292 1 242 0.8082 0.9097
AF-Q97MK9-F1-model_v4 30 292 1 241 0.8078 0.9108
AF-C1FV12-F1-model_v4 30 292 1 242 0.8047 0.9095
AF-Q5HRH8-F1-model_v4 30 292 1 242 0.8047 0.9077
AF-C3L2N7-F1-model_v4 30 292 1 242 0.8045 0.9093
AF-B1IKY4-F1-model_v4 30 292 1 242 0.8044 0.9092
AF-A7FX73-F1-model_v4 30 292 1 242 0.8042 0.9089
AF-A5I5R9-F1-model_v4 30 292 1 242 0.8041 0.9088
Download Full SwissProt Results