PROTEIN: B34_contig_855_1780
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Protein File & Metadata
Source:
B34_contig_855_1780.pdb
Genome ID:
Protein ID:
B34_contig_855_1780
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Protein Sequence
MKLKRILKKI IPASWKKVEE ESERCKSEIL AEIERLNKKV EKQEKTISEL REVAEKTLEI 60 QKCTQKKYSD LNEQIEELQE KNEMLKIGLD KEIGISKEAV WAEIFNNTIN SSEWLKKKKF 120 SPGRWALGYP ALYALYRILD EFRPQNILEL GLGQSSVMTI QYVKTSSQIN HTIVEHDKSW 180 IDFFKKSHEM NENSHIIQMD IEYINYKDAE LVRVYKDFLL ELKNNKTFDL ILIDAPIGGD 240 MKVYSRIDVL SLIPEYLGNQ FVIILDDVNR MQEKRTIREI DNKLKESGIQ AKHEIYSGEK 300 ETCVWASENW DFLLSM 316
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2U8FU38-F1-model_v4 | GT2 | 46 | 309 | 1 | 493 | 0.5562 |
0.8076 |
| AF-A0A5C1Q2D2-F1-model_v4 | GT2 | 58 | 307 | 102 | 484 | 0.53 |
0.8029 |
| UBF29905.1 | GT2 | 63 | 309 | 60 | 436 | 0.4914 |
0.7222 |
| UTD55533.1 | GT4 | 56 | 316 | 384 | 666 | 0.4862 |
0.791 |
| AF-A0A1B1A3Y8-F1-model_v4 | GT0 | 75 | 311 | 263 | 488 | 0.451 |
0.7472 |
| A0A547B9R9 | GT0 | 93 | 309 | 284 | 496 | 0.4451 |
0.7805 |
| AF-A0A7R6VMF3-F1-model_v4 | GT2 | 98 | 310 | 1 | 322 | 0.4289 |
0.8275 |
| A0A1M5KMC8 | GT2 | 59 | 312 | 1 | 262 | 0.4267 |
0.7709 |
| QKS22811.1 | GT4 | 71 | 308 | 203 | 670 | 0.4119 |
0.7307 |
| QWF37437.1 | GT2 | 49 | 313 | 1 | 258 | 0.4077 |
0.7792 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2U8FU38 | GT2 | 46 | 309 | 1 | 493 | 0.5562 |
0.8076 |
| UBF29905.1 | GT2 | 63 | 309 | 60 | 436 | 0.4914 |
0.7222 |
| UTD55533.1 | GT4 | 56 | 316 | 384 | 666 | 0.4862 |
0.791 |
| A0A7R6VMF3 | GT2 | 98 | 310 | 1 | 322 | 0.4289 |
0.8275 |
| A0A1M5KMC8 | GT2 | 59 | 312 | 1 | 262 | 0.4267 |
0.7709 |
| QKS22811.1 | GT4 | 71 | 308 | 203 | 670 | 0.4119 |
0.7307 |
| QWF37437.1 | GT2 | 49 | 313 | 1 | 258 | 0.4077 |
0.7792 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5x7f-assembly1.cif.gz_A-2 | 93 | 308 | 1 | 198 | 0.6134 |
0.7697 |
| 3cbg-assembly1.cif.gz_A-2 | 90 | 308 | 3 | 218 | 0.6075 |
0.7403 |
| 3duw-assembly1.cif.gz_B | 93 | 309 | 1 | 220 | 0.607 |
0.7424 |
| 5n5d-assembly1.cif.gz_B | 89 | 309 | 1 | 222 | 0.6068 |
0.7349 |
| 3ntv-assembly1.cif.gz_B | 95 | 308 | 1 | 209 | 0.6048 |
0.7435 |
| 3tfw-assembly1.cif.gz_B-2 | 92 | 309 | 1 | 219 | 0.6043 |
0.7365 |
| 3dul-assembly1.cif.gz_B | 92 | 309 | 1 | 206 | 0.6027 |
0.7459 |
| 4pca-assembly3.cif.gz_D-4 | 87 | 309 | 4 | 219 | 0.6026 |
0.7397 |
| 4pca-assembly2.cif.gz_B | 91 | 308 | 4 | 217 | 0.6009 |
0.7395 |
| 4pca-assembly1.cif.gz_A | 87 | 308 | 4 | 220 | 0.6009 |
0.7359 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A1Y9I9-F1-model_v4 | 66 | 309 | 2 | 255 | 0.566 |
0.6726 |
| AF-B6CZ62-F1-model_v4 | 66 | 309 | 2 | 255 | 0.5655 |
0.6721 |
| AF-A0A193KX02-F1-model_v4 | 69 | 309 | 3 | 256 | 0.5647 |
0.6799 |
| AF-A7MBI7-F1-model_v4 | 62 | 309 | 4 | 264 | 0.5618 |
0.6738 |
| AF-B6CZ56-F1-model_v4 | 69 | 309 | 18 | 271 | 0.5582 |
0.6883 |
| AF-Q8WZ04-F1-model_v4 | 69 | 309 | 35 | 288 | 0.5384 |
0.6826 |
| AF-O88587-F1-model_v4 | 76 | 309 | 10 | 256 | 0.5278 |
0.658 |
| AF-A4IG53-F1-model_v4 | 87 | 309 | 27 | 263 | 0.5277 |
0.6865 |
| AF-P22734-F1-model_v4 | 77 | 309 | 10 | 256 | 0.5277 |
0.6595 |