PROTEIN: A43_contig_103_1940
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Protein File & Metadata
Source:
A43_contig_103_1940.pdb
Genome ID:
Protein ID:
A43_contig_103_1940
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Protein Sequence
MNPNKRLLSL DVLRGITVAG MILVNNTGKC GYNFAAFAHA KWDGFSPADL VFPMFMFLMG 60 ISTYISLCKY NFQCRPAIAK IIKRSLLLIF IGLVMEWFIT AIDSGNYFDL SQLRLMGVMQ 120 RLGICYGITA LLAVTIPHKR FMPLAIVLLI VYFIFQLFGN GFEKSADNIV GMIDSAILGS 180 NHMYLQGCQF VDPEGILSTI PAVSQVMIGF VCGKIIIDIK DNERRMLNLF LIGTTLLFAG 240 YLLSYACPLN KRLWSPSFVL LTCGIAALSL ALLLYIIDVK QNKKWFSFFE AFGANPLVIY 300 VFSCIAGGLL VHWHIHTAVF NNLLNPLFGN YFGSFMYGVF FLLFNGLLGY VLLKRKIYIK 360 L 361
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55C73-F1-model_v4 | 2 | 361 | 41 | 426 | 0.8494 |
0.9311 |
| AF-A0A368UJV1-F1-model_v4 | 1 | 361 | 15 | 455 | 0.8213 |
0.9254 |
| AF-I1NBX1-F1-model_v4 | 2 | 361 | 24 | 464 | 0.8177 |
0.9307 |
| AF-K7KGM5-F1-model_v4 | 2 | 361 | 25 | 465 | 0.8173 |
0.9311 |
| AF-Q94CC1-F1-model_v4 | 1 | 361 | 30 | 472 | 0.8145 |
0.9313 |
| AF-B4FES9-F1-model_v4 | 2 | 361 | 38 | 484 | 0.8051 |
0.9326 |
| AF-Q5JK28-F1-model_v4 | 2 | 361 | 48 | 488 | 0.8033 |
0.9335 |
| AF-Q5WMX9-F1-model_v4 | 1 | 361 | 49 | 491 | 0.8016 |
0.9314 |
| AF-K7LGV3-F1-model_v4 | 1 | 361 | 49 | 489 | 0.8013 |
0.93 |
| AF-A0A0R0KSG2-F1-model_v4 | 2 | 361 | 70 | 508 | 0.7896 |
0.9328 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 361 | 855 | 1227 | 0.6129 |
0.9513 |
| AF-W8WZP8-F1-model_v4 | GT2 | 2 | 361 | 3 | 348 | 0.4989 |
0.6837 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6CK18-F1-model_v4 | 1 | 361 | 110 | 446 | 0.7257 |
0.868 |
| AF-B3H6K1-F1-model_v4 | 5 | 361 | 104 | 434 | 0.7135 |
0.8581 |
| AF-Q9UTL4-F1-model_v4 | 1 | 361 | 110 | 459 | 0.7117 |
0.8321 |
| AF-Q754I2-F1-model_v4 | 1 | 361 | 107 | 480 | 0.7014 |
0.8114 |
| AF-Q2UQH4-F1-model_v4 | 1 | 361 | 126 | 500 | 0.6999 |
0.8224 |
| AF-Q873N2-F1-model_v4 | 1 | 361 | 111 | 485 | 0.6982 |
0.8114 |
| AF-Q6FLH2-F1-model_v4 | 1 | 361 | 112 | 486 | 0.6979 |
0.8118 |
| AF-P47026-F1-model_v4 | 1 | 361 | 117 | 490 | 0.6971 |
0.8133 |
| AF-Q6BTT3-F1-model_v4 | 1 | 361 | 115 | 493 | 0.6969 |
0.8149 |
| AF-Q4IQ08-F1-model_v4 | 1 | 361 | 123 | 501 | 0.6961 |
0.8189 |