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PROTEIN: A171_contig_4_2006

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Protein File & Metadata
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Source:
A171_contig_4_2006.pdb
Genome ID:
A171.CMAG_4
Protein ID:
A171_contig_4_2006

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Detailed structural information will appear here after analysis...

Protein Sequence 
MEKTSNLKKL   FQGELRFDLL   WQLMWRSWRT   YAVAFGVAAV   VSVVIALSLP   RYYESEIMLA 60
PEYSSSSSSM   GSLGSLASMA   GLNLGSSSSD   DAIYPKLYPD   LMASTDFIVT   LFPIKVQTAD 120
GKFKGMYADY   MQYYQKEAWW   TTLGKKVKKL   FAKNKTEERA   SQHVDPFRLN   RTQTLLIKAI 180
SGKVTCVVDE   KTDVITLKVT   DQDPLICANM   ANVVRKELQD   FIIEYRTKKA   KTELERMQKL 240
QKDAYATYMS   KQREYNSTAD   ANLDVVLQSY   RSQQTSLEND   MQLAYNVYSQ   LSQQVQLARA 300
KVLERTPAFT   TIQNATVPIQ   PAGPRRTFIV   LGFMVVAFIL   TTVYIIIRK 349
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A077ZIR1-F1-model_v4 8 349 8 342 0.568 0.6073
AF-A0A0H3GGH7-F1-model_v4 8 349 3 336 0.5624 0.6019
AF-O33789-F1-model_v4 8 349 13 346 0.5615 0.6057
AF-Q329W4-F1-model_v4 8 349 14 347 0.5611 0.6072
AF-P0AG00-F1-model_v4 5 349 12 346 0.5554 0.5994
AF-P26266-F1-model_v4 2 349 22 362 0.5291 0.5817
AF-Q32IY2-F1-model_v4 4 349 24 362 0.5259 0.5821
AF-Q9I1N4-F1-model_v4 1 349 1 481 0.5143 0.681
AF-K0EV96-F1-model_v4 9 349 1 197 0.4479 0.8565
AF-K0EZX4-F1-model_v4 6 349 1 197 0.4323 0.8323
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0B4X6N3-F1-model_v4 GT0 12 349 23 476 0.4073 0.637
A0A2L0WKS9 GT0 12 349 23 477 0.4066 0.6371
AF-A0A2L0WKS9-F1-model_v4 GT0 12 349 23 477 0.4066 0.6371
AF-A0A387H7L2-F1-model_v4 GT0 12 349 23 476 0.4051 0.6335
AF-A0A1L5NL39-F1-model_v4 GT0 12 349 23 476 0.4041 0.6321
AF-A0A1L5P6C4-F1-model_v4 GT0 12 349 23 476 0.4018 0.6287
AF-A0A8B0SMZ4-F1-model_v4 GT4 10 349 101 873 0.3761 0.5917
QNN05996.1 GT4 9 349 7 461 0.3686 0.5824
WGH78710.1 PL1_2 5 349 29 433 0.3502 0.5456
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
QNN05996.1 GT4 9 349 7 461 0.3686 0.5824
WGH78710.1 PL1_2 5 349 29 433 0.3502 0.5456
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
8p3p-assembly1.cif.gz_C 14 349 1 329 0.5693 0.6092
8bhw-assembly1.cif.gz_A 14 349 1 330 0.5688 0.6072
8p3o-assembly1.cif.gz_B 9 349 1 330 0.555 0.5944
8c0e-assembly1.cif.gz_B 34 337 1 275 0.5215 0.6005
8c0e-assembly1.cif.gz_D 34 337 1 276 0.5213 0.6003
8c0e-assembly1.cif.gz_H 34 337 1 277 0.5205 0.5984
7nhr-assembly1.cif.gz_G 6 349 1 308 0.4629 0.6483
7nii-assembly1.cif.gz_H 6 349 1 309 0.4584 0.6402
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P32014-F1-model_v4 25 348 23 380 0.579 0.6706
AF-P0AG01-F1-model_v4 8 349 12 346 0.5645 0.607
AF-P0AG02-F1-model_v4 8 349 12 346 0.5634 0.6061
AF-O33789-F1-model_v4 8 349 13 346 0.5615 0.6057
AF-Q54519-F1-model_v4 8 349 5 202 0.5603 0.787
AF-P0AG00-F1-model_v4 5 349 12 346 0.5554 0.5994
AF-P26266-F1-model_v4 2 349 22 362 0.5291 0.5817
AF-P33698-F1-model_v4 9 349 23 483 0.4634 0.6595
AF-O52788-F1-model_v4 8 349 12 461 0.4297 0.5967
AF-P76387-F1-model_v4 8 349 16 448 0.429 0.593
Download Full SwissProt Results