PROTEIN: A104_contig_5292_4
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Protein File & Metadata
Source:
A104_contig_5292_4.pdb
Genome ID:
Protein ID:
A104_contig_5292_4
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Protein Sequence
MNERIKSCDI VFVLDKSSSI HHNNEKICSK VNGAVDKLKT VCDEIYITVF VFDTLLYTLL 60 MRQPVKEFQK LDYREYKTTG GTALYDCLME SVLIMKDKLQ PANNYHKVIF WAMSDFNDKS 120 SCLETDVNMM SKNGLIFGTL SSKEIYEKLI QEQIRDYNWT YKTTTLHTAI YKELDLIRDA 180 VEKTQEYLNV IDKARKTLEL MNRYGNGISN CCFYWLDLQG LLYRKYGIEW KSPADLNPDT 240 HFS 243
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EN71-F1-model_v4 | 1 | 189 | 18 | 228 | 0.5696 |
0.725 |
| AF-A0A3P7E8F4-F1-model_v4 | 2 | 175 | 1 | 180 | 0.5667 |
0.7146 |
| AF-A0A0R0GDN4-F1-model_v4 | 4 | 241 | 98 | 350 | 0.391 |
0.5477 |
| AF-Q9QXH4-F1-model_v4 | 1 | 179 | 144 | 348 | 0.3302 |
0.7317 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3n2n-assembly1.cif.gz_B | 1 | 241 | 1 | 185 | 0.5973 |
0.6982 |
| 3gxb-assembly2.cif.gz_B | 6 | 176 | 1 | 177 | 0.5662 |
0.6929 |
| 8fzu-assembly2.cif.gz_B | 1 | 240 | 4 | 253 | 0.5064 |
0.5402 |
| 2odp-assembly1.cif.gz_A | 3 | 235 | 5 | 436 | 0.451 |
0.6334 |
| 2odq-assembly1.cif.gz_A | 3 | 235 | 5 | 438 | 0.4503 |
0.6342 |
| 6fpy-assembly2.cif.gz_B | 2 | 180 | 239 | 464 | 0.3815 |
0.7201 |
| 6fpz-assembly2.cif.gz_B | 2 | 180 | 239 | 463 | 0.3788 |
0.7137 |
| 6fpy-assembly1.cif.gz_A | 2 | 180 | 239 | 463 | 0.3775 |
0.7121 |
| 4neh-assembly1.cif.gz_A | 1 | 176 | 99 | 312 | 0.3176 |
0.7031 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q63416-F1-model_v4 | 4 | 242 | 279 | 735 | 0.351 |
0.5658 |
| AF-Q9QXH4-F1-model_v4 | 1 | 179 | 144 | 348 | 0.3302 |
0.7317 |