Genome Details
Selected Rep_genome_ID: SW127_40
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Synergistaceae
Genus
Caccocola
Species
Caccocola faecigallinarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR062429 | 2,688,424 | 100% | 0% | China | Asia | CGMR |
| HRGMv2_3508 | 2,628,389 | 100% | 0% | Japan | Asia | HRGM |
| Rep_2700 | 2,339,213 | 98.151% | 0% | NA | NA | WIS |
| SW127_40 | 2,642,242 | 100% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW127_40_CGC3 | CGCFAM_00135 | Yes | 4 | 1 | |
| SW127_40_CGC10 | CGCFAM_00846 | Yes | 3 | 1 | |
| SW127_40_CGC7 | CGCFAM_11054 | Yes | 11 | 3 | |
| SW127_40_CGC2 | CGCFAM_11055 | Yes | 10 | 1 |
Top CAZyme Families