Genome Details
Selected Rep_genome_ID: KY122_37
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp900542795
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR080231 | 2,464,505 | 94.14% | 0.06% | China | Asia | CGMR |
| GCA_021631075.1_ASM2163107v1_genomic | 2,338,672 | 90.31% | 0.07% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0355 | 2,988,945 | 98.17% | 0% | Cameroon | Africa | HRGM |
| KY122_37 | 2,938,336 | 98.39% | 0% | NA | Africa | H3AfricaPhase2 |
| MGYG000001630 | 2,503,993 | 95.43% | 0% | China | Asia | UHGG |
| Rep_121 | 2,501,512 | 92.3172% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| KY122_37_CGC2 | CGCFAM_00001 | Yes | 7 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| KY122_37_CGC19 | CGCFAM_00025 | Yes | 13 | 5 | pectin/alpha-glucan |
| KY122_37_CGC15 | CGCFAM_00081 | Yes | 15 | 1 | |
| KY122_37_CGC3 | CGCFAM_00798 | Yes | 5 | 1 | |
| KY122_37_CGC12 | CGCFAM_00862 | Yes | 5 | 2 | |
| KY122_37_CGC10 | CGCFAM_07366 | Yes | 7 | 1 | |
| KY122_37_CGC6 | CGCFAM_09564 | Yes | 5 | 1 | |
| KY122_37_CGC18 | CGCFAM_09565 | Yes | 3 | 1 |
Top CAZyme Families