Genome Details
Selected Rep_genome_ID: GH124_90
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp934202965
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH124_90 | 2,259,352 | 99.4% | 0.6% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_4796 | 1,929,536 | 92.07% | 2.47% | Ethiopia | Africa | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_L_18_2327.92 | 2,145,667 | 98.2% | 0.62% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| GH124_90_CGC17 | CGCFAM_00004 | Yes | 9 | 5 | alpha-glucan |
| GH124_90_CGC11 | CGCFAM_00279 | Yes | 8 | 2 | |
| GH124_90_CGC6 | CGCFAM_00313 | Yes | 4 | 1 | |
| GH124_90_CGC5 | CGCFAM_00329 | Yes | 6 | 1 | |
| GH124_90_CGC15 | CGCFAM_00520 | Yes | 5 | 1 | |
| GH124_90_CGC12 | CGCFAM_01053 | Yes | 4 | 1 | |
| GH124_90_CGC13 | CGCFAM_01068 | Yes | 3 | 1 | |
| GH124_90_CGC18 | CGCFAM_01696 | Yes | 4 | 1 | |
| GH124_90_CGC16 | CGCFAM_02042 | Yes | 4 | 1 | |
| GH124_90_CGC2 | CGCFAM_02245 | Yes | 3 | 1 | |
| GH124_90_CGC3 | CGCFAM_02598 | Yes | 9 | 2 | |
| GH124_90_CGC14 | CGCFAM_06711 | Yes | 9 | 1 | |
| GH124_90_CGC1 | CGCFAM_09433 | Yes | 10 | 2 |
Top CAZyme Families